Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 MED11-203ENST00000575284 652 ntTSL 3 BASIC23.1■■□□□ 1.29
CFTRP13569 AC093072.1-201ENST00000589196 602 ntTSL 4 BASIC23.1■■□□□ 1.29
CFTRP13569 LINC00694-204ENST00000637612 1059 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
CFTRP13569 STT3A-211ENST00000529196 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CFTRP13569 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC23.1■■□□□ 1.29
CFTRP13569 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CFTRP13569 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CFTRP13569 GGPS1-203ENST00000391855 1407 ntTSL 2 BASIC23.09■■□□□ 1.29
CFTRP13569 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC23.09■■□□□ 1.29
CFTRP13569 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
CFTRP13569 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CFTRP13569 LINC00552-201ENST00000625151 2579 ntBASIC23.09■■□□□ 1.29
CFTRP13569 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
CFTRP13569 VOPP1-204ENST00000418904 1317 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CFTRP13569 PSMA1-201ENST00000396394 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CFTRP13569 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC23.09■■□□□ 1.29
CFTRP13569 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
CFTRP13569 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
CFTRP13569 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
CFTRP13569 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
CFTRP13569 AL138885.2-201ENST00000420389 539 ntTSL 3 BASIC23.09■■□□□ 1.29
CFTRP13569 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC23.09■■□□□ 1.29
CFTRP13569 SMCR2-201ENST00000456090 564 ntTSL 2 BASIC23.09■■□□□ 1.29
CFTRP13569 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CFTRP13569 MIR22HG-206ENST00000573127 899 ntTSL 3 BASIC23.09■■□□□ 1.29
CFTRP13569 AC090950.1-202ENST00000605733 644 ntBASIC23.09■■□□□ 1.29
CFTRP13569 AC009118.3-201ENST00000622896 873 ntBASIC23.09■■□□□ 1.29
CFTRP13569 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC23.09■■□□□ 1.29
CFTRP13569 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
CFTRP13569 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CFTRP13569 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CFTRP13569 USP8-219ENST00000625664 1568 ntTSL 5 BASIC23.09■■□□□ 1.29
CFTRP13569 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
CFTRP13569 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CFTRP13569 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CFTRP13569 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CFTRP13569 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CFTRP13569 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC23.08■■□□□ 1.29
CFTRP13569 SUCLG2-204ENST00000493112 1516 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
CFTRP13569 BANP-201ENST00000286122 2368 ntTSL 5 BASIC23.08■■□□□ 1.29
CFTRP13569 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
CFTRP13569 BX088651.4-202ENST00000428895 1479 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CFTRP13569 AL590399.1-202ENST00000429818 1480 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CFTRP13569 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CFTRP13569 AL512625.1-202ENST00000476224 1480 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CFTRP13569 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
CFTRP13569 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CFTRP13569 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
CFTRP13569 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CFTRP13569 FTLP3-201ENST00000427242 528 ntBASIC23.08■■□□□ 1.29
CFTRP13569 AC116347.1-201ENST00000442824 720 ntBASIC23.08■■□□□ 1.29
CFTRP13569 RN7SL363P-201ENST00000482412 273 ntBASIC23.08■■□□□ 1.29
CFTRP13569 ROPN1L-AS1-201ENST00000513037 189 ntTSL 2 BASIC23.08■■□□□ 1.29
CFTRP13569 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC23.08■■□□□ 1.29
CFTRP13569 DERL1-204ENST00000519018 575 ntTSL 4 BASIC23.08■■□□□ 1.29
CFTRP13569 IFI27L1-203ENST00000553664 647 ntTSL 5 BASIC23.08■■□□□ 1.29
CFTRP13569 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CFTRP13569 BMS1P8-203ENST00000567036 614 ntTSL 3 BASIC23.08■■□□□ 1.29
CFTRP13569 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC23.08■■□□□ 1.29
CFTRP13569 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC23.08■■□□□ 1.29
CFTRP13569 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
CFTRP13569 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CFTRP13569 DDC-213ENST00000617822 1809 ntTSL 3 BASIC23.08■■□□□ 1.28
CFTRP13569 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC23.07■■□□□ 1.28
CFTRP13569 OLFML1-204ENST00000530135 1620 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
CFTRP13569 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC23.07■■□□□ 1.28
CFTRP13569 OR52L1-201ENST00000332249 1094 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
CFTRP13569 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
CFTRP13569 COQ4-202ENST00000372875 928 ntTSL 2 BASIC23.07■■□□□ 1.28
CFTRP13569 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
CFTRP13569 VPS33A-202ENST00000451053 1154 ntTSL 3 BASIC23.07■■□□□ 1.28
CFTRP13569 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CFTRP13569 OSGIN1-206ENST00000565123 833 ntTSL 2 BASIC23.07■■□□□ 1.28
CFTRP13569 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC23.07■■□□□ 1.28
CFTRP13569 AC010503.4-201ENST00000615487 688 ntBASIC23.07■■□□□ 1.28
CFTRP13569 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
CFTRP13569 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
CFTRP13569 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
CFTRP13569 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC23.06■■□□□ 1.28
CFTRP13569 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CFTRP13569 FCRLA-202ENST00000294796 766 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CFTRP13569 TMEM79-202ENST00000357501 975 ntTSL 3 BASIC23.06■■□□□ 1.28
CFTRP13569 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC23.06■■□□□ 1.28
CFTRP13569 CLDN10-AS1-201ENST00000416909 895 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CFTRP13569 AL450322.2-201ENST00000421629 759 ntTSL 3 BASIC23.06■■□□□ 1.28
CFTRP13569 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC23.06■■□□□ 1.28
CFTRP13569 AC010677.1-201ENST00000441690 412 ntBASIC23.06■■□□□ 1.28
CFTRP13569 PRDX2P3-201ENST00000515779 586 ntBASIC23.06■■□□□ 1.28
CFTRP13569 AP001979.2-201ENST00000526254 975 ntTSL 5 BASIC23.06■■□□□ 1.28
CFTRP13569 AC090616.6-202ENST00000583601 1088 ntBASIC23.06■■□□□ 1.28
CFTRP13569 AC073592.10-201ENST00000624789 597 ntBASIC23.06■■□□□ 1.28
CFTRP13569 RPS9-213ENST00000626547 476 ntTSL 2 BASIC23.06■■□□□ 1.28
CFTRP13569 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
CFTRP13569 LINC00910-201ENST00000341011 2303 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CFTRP13569 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
CFTRP13569 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC23.06■■□□□ 1.28
CFTRP13569 KATNAL1-202ENST00000380617 1634 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
CFTRP13569 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC23.06■■□□□ 1.28
CFTRP13569 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CFTRP13569 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms