Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC004241.5-201ENST00000623870 2448 ntBASIC13.85□□□□□ -0.19
PCNAP12004 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PCNAP12004 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
PCNAP12004 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCNAP12004 KRT8P29-201ENST00000420409 1371 ntBASIC13.85□□□□□ -0.19
PCNAP12004 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.85□□□□□ -0.19
PCNAP12004 REXO1L1P-201ENST00000379010 6598 ntBASIC13.85□□□□□ -0.19
PCNAP12004 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCNAP12004 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCNAP12004 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCNAP12004 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.85□□□□□ -0.19
PCNAP12004 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PCNAP12004 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCNAP12004 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCNAP12004 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.85□□□□□ -0.19
PCNAP12004 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.85□□□□□ -0.19
PCNAP12004 CYP4F23P-201ENST00000593402 1579 ntBASIC13.85□□□□□ -0.19
PCNAP12004 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCNAP12004 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCNAP12004 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
PCNAP12004 AC083964.2-201ENST00000623988 2396 ntBASIC13.85□□□□□ -0.19
PCNAP12004 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCNAP12004 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCNAP12004 AC072061.1-201ENST00000569710 2234 ntBASIC13.85□□□□□ -0.19
PCNAP12004 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
PCNAP12004 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.85□□□□□ -0.19
PCNAP12004 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
PCNAP12004 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PCNAP12004 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.85□□□□□ -0.19
PCNAP12004 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
PCNAP12004 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCNAP12004 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PCNAP12004 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.85□□□□□ -0.19
PCNAP12004 TUBB8P8-201ENST00000458717 1058 ntBASIC13.85□□□□□ -0.19
PCNAP12004 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.85□□□□□ -0.19
PCNAP12004 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.85□□□□□ -0.19
PCNAP12004 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.85□□□□□ -0.19
PCNAP12004 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.85□□□□□ -0.19
PCNAP12004 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.85□□□□□ -0.19
PCNAP12004 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.85□□□□□ -0.19
PCNAP12004 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.85□□□□□ -0.19
PCNAP12004 AL096828.3-201ENST00000615354 462 ntBASIC13.85□□□□□ -0.19
PCNAP12004 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.85□□□□□ -0.19
PCNAP12004 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCNAP12004 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PCNAP12004 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCNAP12004 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCNAP12004 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PCNAP12004 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCNAP12004 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PCNAP12004 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCNAP12004 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PCNAP12004 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PCNAP12004 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
PCNAP12004 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PCNAP12004 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PCNAP12004 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC13.85□□□□□ -0.19
PCNAP12004 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCNAP12004 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
PCNAP12004 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
PCNAP12004 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.84□□□□□ -0.19
PCNAP12004 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.84□□□□□ -0.19
PCNAP12004 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PCNAP12004 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
PCNAP12004 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.84□□□□□ -0.19
PCNAP12004 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
PCNAP12004 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PCNAP12004 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PCNAP12004 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PCNAP12004 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PCNAP12004 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PCNAP12004 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PCNAP12004 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
PCNAP12004 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
PCNAP12004 AC068760.1-201ENST00000493579 1953 ntBASIC13.84□□□□□ -0.19
PCNAP12004 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PCNAP12004 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
PCNAP12004 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
PCNAP12004 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.84□□□□□ -0.19
PCNAP12004 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PCNAP12004 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PCNAP12004 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PCNAP12004 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PCNAP12004 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.84□□□□□ -0.19
PCNAP12004 GK-202ENST00000378941 458 ntTSL 3 BASIC13.84□□□□□ -0.19
PCNAP12004 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
PCNAP12004 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.84□□□□□ -0.19
PCNAP12004 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.84□□□□□ -0.19
PCNAP12004 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.84□□□□□ -0.19
PCNAP12004 RPL18P13-201ENST00000478088 569 ntBASIC13.84□□□□□ -0.19
PCNAP12004 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PCNAP12004 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.84□□□□□ -0.19
PCNAP12004 SCARNA21-201ENST00000517026 139 ntBASIC13.84□□□□□ -0.19
PCNAP12004 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.84□□□□□ -0.19
PCNAP12004 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.84□□□□□ -0.19
PCNAP12004 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
PCNAP12004 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
PCNAP12004 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.84□□□□□ -0.19
PCNAP12004 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
PCNAP12004 AL591471.1-201ENST00000621855 229 ntBASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms