Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD48P09326 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.62□□□□□ -0.07
CD48P09326 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD48P09326 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.62□□□□□ -0.07
CD48P09326 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.62□□□□□ -0.07
CD48P09326 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC14.62□□□□□ -0.07
CD48P09326 CHCHD2P2-201ENST00000503744 321 ntBASIC14.62□□□□□ -0.07
CD48P09326 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.62□□□□□ -0.07
CD48P09326 AC005740.1-201ENST00000515639 522 ntBASIC14.62□□□□□ -0.07
CD48P09326 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD48P09326 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
CD48P09326 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD48P09326 CMC2-204ENST00000562713 573 ntTSL 3 BASIC14.62□□□□□ -0.07
CD48P09326 CMC2-209ENST00000565108 399 ntTSL 2 BASIC14.62□□□□□ -0.07
CD48P09326 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
CD48P09326 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.62□□□□□ -0.07
CD48P09326 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CD48P09326 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.62□□□□□ -0.07
CD48P09326 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC14.62□□□□□ -0.07
CD48P09326 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD48P09326 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC14.62□□□□□ -0.07
CD48P09326 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD48P09326 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD48P09326 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC14.62□□□□□ -0.07
CD48P09326 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD48P09326 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD48P09326 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC14.62□□□□□ -0.07
CD48P09326 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD48P09326 AC025183.3-201ENST00000623526 1482 ntBASIC14.62□□□□□ -0.07
CD48P09326 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CD48P09326 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.62□□□□□ -0.07
CD48P09326 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14.62□□□□□ -0.07
CD48P09326 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD48P09326 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.62□□□□□ -0.07
CD48P09326 AC093462.1-201ENST00000621167 1683 ntBASIC14.61□□□□□ -0.07
CD48P09326 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CD48P09326 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.61□□□□□ -0.07
CD48P09326 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD48P09326 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CD48P09326 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.61□□□□□ -0.07
CD48P09326 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD48P09326 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.61□□□□□ -0.07
CD48P09326 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD48P09326 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC14.61□□□□□ -0.07
CD48P09326 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.61□□□□□ -0.07
CD48P09326 AC019294.4-201ENST00000561777 2905 ntBASIC14.61□□□□□ -0.07
CD48P09326 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD48P09326 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD48P09326 MEX3B-202ENST00000558133 4333 ntBASIC14.61□□□□□ -0.07
CD48P09326 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD48P09326 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CD48P09326 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD48P09326 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD48P09326 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.61□□□□□ -0.07
CD48P09326 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CD48P09326 AL391647.1-201ENST00000395664 511 ntBASIC14.61□□□□□ -0.07
CD48P09326 AC006033.1-201ENST00000440505 426 ntBASIC14.61□□□□□ -0.07
CD48P09326 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CD48P09326 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CD48P09326 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.61□□□□□ -0.07
CD48P09326 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CD48P09326 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
CD48P09326 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.61□□□□□ -0.07
CD48P09326 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CD48P09326 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CD48P09326 AL805961.1-203ENST00000641078 1258 ntBASIC14.61□□□□□ -0.07
CD48P09326 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.61□□□□□ -0.07
CD48P09326 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD48P09326 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CD48P09326 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD48P09326 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD48P09326 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CD48P09326 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD48P09326 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CD48P09326 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CD48P09326 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD48P09326 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD48P09326 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.61□□□□□ -0.07
CD48P09326 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CD48P09326 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD48P09326 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD48P09326 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CD48P09326 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CD48P09326 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD48P09326 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD48P09326 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.6□□□□□ -0.07
CD48P09326 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CD48P09326 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC14.6□□□□□ -0.07
CD48P09326 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CD48P09326 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD48P09326 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CD48P09326 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CD48P09326 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CD48P09326 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD48P09326 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC14.6□□□□□ -0.07
CD48P09326 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CD48P09326 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CD48P09326 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.6□□□□□ -0.07
CD48P09326 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD48P09326 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms