Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ALX3O95076 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ALX3O95076 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ALX3O95076 PLA2G15-201ENST00000219345 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ALX3O95076 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ALX3O95076 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ALX3O95076 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ALX3O95076 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ALX3O95076 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ALX3O95076 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
ALX3O95076 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ALX3O95076 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ALX3O95076 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ALX3O95076 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.62□□□□□ -0.39
ALX3O95076 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ALX3O95076 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ALX3O95076 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
ALX3O95076 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ALX3O95076 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ALX3O95076 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
ALX3O95076 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ALX3O95076 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.62□□□□□ -0.39
ALX3O95076 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ALX3O95076 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC12.62□□□□□ -0.39
ALX3O95076 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
ALX3O95076 AC125807.2-201ENST00000513358 3514 ntBASIC12.62□□□□□ -0.39
ALX3O95076 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ALX3O95076 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
ALX3O95076 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ALX3O95076 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ALX3O95076 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ALX3O95076 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.61□□□□□ -0.39
ALX3O95076 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ALX3O95076 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ALX3O95076 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ALX3O95076 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
ALX3O95076 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
ALX3O95076 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ALX3O95076 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ALX3O95076 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
ALX3O95076 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ALX3O95076 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.61□□□□□ -0.39
ALX3O95076 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ALX3O95076 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ALX3O95076 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
ALX3O95076 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
ALX3O95076 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
ALX3O95076 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC12.61□□□□□ -0.39
ALX3O95076 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC12.61□□□□□ -0.39
ALX3O95076 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ALX3O95076 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.61□□□□□ -0.39
ALX3O95076 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.61□□□□□ -0.39
ALX3O95076 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC12.61□□□□□ -0.39
ALX3O95076 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC12.61□□□□□ -0.39
ALX3O95076 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC12.61□□□□□ -0.39
ALX3O95076 PTP4A1P2-201ENST00000546033 454 ntBASIC12.61□□□□□ -0.39
ALX3O95076 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC12.61□□□□□ -0.39
ALX3O95076 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC12.61□□□□□ -0.39
ALX3O95076 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.61□□□□□ -0.39
ALX3O95076 MIR6805-201ENST00000615055 62 ntBASIC12.61□□□□□ -0.39
ALX3O95076 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ALX3O95076 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ALX3O95076 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
ALX3O95076 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
ALX3O95076 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ALX3O95076 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ALX3O95076 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.61□□□□□ -0.39
ALX3O95076 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ALX3O95076 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
ALX3O95076 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ALX3O95076 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ALX3O95076 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ALX3O95076 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
ALX3O95076 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ALX3O95076 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ALX3O95076 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
ALX3O95076 AC134312.5-201ENST00000568031 1313 ntBASIC12.61□□□□□ -0.39
ALX3O95076 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ALX3O95076 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
ALX3O95076 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ALX3O95076 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.6□□□□□ -0.39
ALX3O95076 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.6□□□□□ -0.39
ALX3O95076 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
ALX3O95076 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
ALX3O95076 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ALX3O95076 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ALX3O95076 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC12.6□□□□□ -0.39
ALX3O95076 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ALX3O95076 GBP1P1-201ENST00000394662 1740 ntBASIC12.6□□□□□ -0.39
ALX3O95076 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ALX3O95076 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ALX3O95076 AC072061.1-201ENST00000569710 2234 ntBASIC12.6□□□□□ -0.39
ALX3O95076 AC020910.5-201ENST00000623668 1865 ntBASIC12.6□□□□□ -0.39
ALX3O95076 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ALX3O95076 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ALX3O95076 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ALX3O95076 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ALX3O95076 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ALX3O95076 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.6□□□□□ -0.39
ALX3O95076 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms