Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
UPK2O00526 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC11.36□□□□□ -0.59
UPK2O00526 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC11.36□□□□□ -0.59
UPK2O00526 DUX4L45-201ENST00000566406 1057 ntBASIC11.36□□□□□ -0.59
UPK2O00526 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC11.36□□□□□ -0.59
UPK2O00526 SNORA50.1-201ENST00000628590 135 ntBASIC11.36□□□□□ -0.59
UPK2O00526 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
UPK2O00526 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC11.36□□□□□ -0.59
UPK2O00526 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
UPK2O00526 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
UPK2O00526 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC11.36□□□□□ -0.59
UPK2O00526 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
UPK2O00526 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC11.36□□□□□ -0.59
UPK2O00526 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC11.36□□□□□ -0.59
UPK2O00526 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
UPK2O00526 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
UPK2O00526 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC11.36□□□□□ -0.59
UPK2O00526 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
UPK2O00526 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
UPK2O00526 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
UPK2O00526 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC11.36□□□□□ -0.59
UPK2O00526 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
UPK2O00526 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
UPK2O00526 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
UPK2O00526 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC11.36□□□□□ -0.59
UPK2O00526 AMT-256ENST00000638063 1783 ntTSL 5 BASIC11.36□□□□□ -0.59
UPK2O00526 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
UPK2O00526 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
UPK2O00526 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
UPK2O00526 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC11.36□□□□□ -0.59
UPK2O00526 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC11.36□□□□□ -0.59
UPK2O00526 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
UPK2O00526 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
UPK2O00526 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC11.36□□□□□ -0.59
UPK2O00526 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC11.35□□□□□ -0.59
UPK2O00526 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC11.35□□□□□ -0.59
UPK2O00526 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK2O00526 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
UPK2O00526 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC11.35□□□□□ -0.59
UPK2O00526 LINC01815-202ENST00000641468 1409 ntBASIC11.35□□□□□ -0.59
UPK2O00526 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK2O00526 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
UPK2O00526 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC11.35□□□□□ -0.59
UPK2O00526 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC11.35□□□□□ -0.59
UPK2O00526 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
UPK2O00526 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
UPK2O00526 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK2O00526 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK2O00526 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
UPK2O00526 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
UPK2O00526 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK2O00526 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK2O00526 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK2O00526 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK2O00526 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK2O00526 ANKRD19P-201ENST00000338192 862 ntBASIC11.35□□□□□ -0.59
UPK2O00526 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
UPK2O00526 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK2O00526 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
UPK2O00526 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
UPK2O00526 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC11.35□□□□□ -0.59
UPK2O00526 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC11.35□□□□□ -0.59
UPK2O00526 HLA-V-201ENST00000429037 534 ntBASIC11.35□□□□□ -0.59
UPK2O00526 VDAC1P1-201ENST00000439229 848 ntBASIC11.35□□□□□ -0.59
UPK2O00526 CSF2RBP1-201ENST00000447905 391 ntBASIC11.35□□□□□ -0.59
UPK2O00526 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK2O00526 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC11.35□□□□□ -0.59
UPK2O00526 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC11.35□□□□□ -0.59
UPK2O00526 SKA2-205ENST00000580541 689 ntTSL 3 BASIC11.35□□□□□ -0.59
UPK2O00526 AC005324.6-201ENST00000587972 613 ntBASIC11.35□□□□□ -0.59
UPK2O00526 KLK11-210ENST00000600362 759 ntTSL 3 BASIC11.35□□□□□ -0.59
UPK2O00526 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC11.35□□□□□ -0.59
UPK2O00526 AL023803.2-201ENST00000620080 638 ntBASIC11.35□□□□□ -0.59
UPK2O00526 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK2O00526 FAM90A7P-201ENST00000382628 1395 ntBASIC11.35□□□□□ -0.59
UPK2O00526 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK2O00526 FAM90A23P-201ENST00000400136 1395 ntBASIC11.35□□□□□ -0.59
UPK2O00526 KRT8P29-201ENST00000420409 1371 ntBASIC11.35□□□□□ -0.59
UPK2O00526 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK2O00526 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC11.35□□□□□ -0.59
UPK2O00526 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK2O00526 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
UPK2O00526 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC11.35□□□□□ -0.59
UPK2O00526 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC11.35□□□□□ -0.59
UPK2O00526 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC11.35□□□□□ -0.59
UPK2O00526 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK2O00526 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
UPK2O00526 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK2O00526 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
UPK2O00526 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK2O00526 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC11.35□□□□□ -0.59
UPK2O00526 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK2O00526 AC004623.1-201ENST00000624592 2127 ntBASIC11.35□□□□□ -0.59
UPK2O00526 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK2O00526 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
UPK2O00526 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK2O00526 LINC01165-201ENST00000445190 1623 ntBASIC11.35□□□□□ -0.59
UPK2O00526 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
UPK2O00526 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
UPK2O00526 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms