Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 LINC00265-2P-201ENST00000413372 782 ntBASIC14.84□□□□□ -0.03
CLDN5O00501 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC14.84□□□□□ -0.03
CLDN5O00501 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC14.84□□□□□ -0.03
CLDN5O00501 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC14.84□□□□□ -0.03
CLDN5O00501 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN5O00501 AC018638.5-201ENST00000450885 754 ntBASIC14.84□□□□□ -0.03
CLDN5O00501 RPS2P36-201ENST00000456516 831 ntBASIC14.84□□□□□ -0.03
CLDN5O00501 AC130709.1-201ENST00000484779 1212 ntBASIC14.84□□□□□ -0.03
CLDN5O00501 OR5BD1P-201ENST00000532527 817 ntBASIC14.84□□□□□ -0.03
CLDN5O00501 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC14.84□□□□□ -0.03
CLDN5O00501 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC14.84□□□□□ -0.03
CLDN5O00501 MIR2392-201ENST00000584881 84 ntBASIC14.84□□□□□ -0.03
CLDN5O00501 AC107464.3-201ENST00000609172 737 ntBASIC14.84□□□□□ -0.03
CLDN5O00501 AC005618.3-201ENST00000624928 458 ntBASIC14.84□□□□□ -0.03
CLDN5O00501 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN5O00501 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.84□□□□□ -0.03
CLDN5O00501 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.84□□□□□ -0.03
CLDN5O00501 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC14.84□□□□□ -0.03
CLDN5O00501 PDXDC2P-206ENST00000534700 1315 ntBASIC14.84□□□□□ -0.03
CLDN5O00501 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC14.84□□□□□ -0.03
CLDN5O00501 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN5O00501 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN5O00501 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN5O00501 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CLDN5O00501 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN5O00501 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN5O00501 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.84□□□□□ -0.03
CLDN5O00501 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN5O00501 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN5O00501 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CLDN5O00501 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.83□□□□□ -0.03
CLDN5O00501 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CLDN5O00501 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.83□□□□□ -0.03
CLDN5O00501 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CLDN5O00501 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
CLDN5O00501 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CLDN5O00501 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CLDN5O00501 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
CLDN5O00501 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CLDN5O00501 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.83□□□□□ -0.04
CLDN5O00501 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN5O00501 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.83□□□□□ -0.04
CLDN5O00501 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC14.83□□□□□ -0.04
CLDN5O00501 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.83□□□□□ -0.04
CLDN5O00501 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN5O00501 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN5O00501 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN5O00501 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN5O00501 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN5O00501 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CLDN5O00501 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN5O00501 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC14.83□□□□□ -0.04
CLDN5O00501 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN5O00501 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN5O00501 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.83□□□□□ -0.04
CLDN5O00501 AC098935.1-201ENST00000446057 611 ntBASIC14.83□□□□□ -0.04
CLDN5O00501 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC14.83□□□□□ -0.04
CLDN5O00501 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC14.83□□□□□ -0.04
CLDN5O00501 RGS5-216ENST00000449680 788 ntTSL 3 BASIC14.83□□□□□ -0.04
CLDN5O00501 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CLDN5O00501 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC14.83□□□□□ -0.04
CLDN5O00501 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC14.83□□□□□ -0.04
CLDN5O00501 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC14.83□□□□□ -0.04
CLDN5O00501 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC14.83□□□□□ -0.04
CLDN5O00501 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN5O00501 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC14.83□□□□□ -0.04
CLDN5O00501 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN5O00501 MIR4265-201ENST00000582152 99 ntBASIC14.83□□□□□ -0.04
CLDN5O00501 RN7SL190P-201ENST00000582519 257 ntBASIC14.83□□□□□ -0.04
CLDN5O00501 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC14.83□□□□□ -0.04
CLDN5O00501 SPCS2P2-201ENST00000603270 608 ntBASIC14.83□□□□□ -0.04
CLDN5O00501 AC005041.3-201ENST00000606287 649 ntBASIC14.83□□□□□ -0.04
CLDN5O00501 AL031673.1-201ENST00000611460 466 ntBASIC14.83□□□□□ -0.04
CLDN5O00501 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CLDN5O00501 HPX-213ENST00000615166 826 ntTSL 5 BASIC14.83□□□□□ -0.04
CLDN5O00501 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CLDN5O00501 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CLDN5O00501 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN5O00501 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN5O00501 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN5O00501 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN5O00501 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CLDN5O00501 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN5O00501 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN5O00501 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN5O00501 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CLDN5O00501 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.83□□□□□ -0.04
CLDN5O00501 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN5O00501 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CLDN5O00501 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CLDN5O00501 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN5O00501 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
CLDN5O00501 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN5O00501 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CLDN5O00501 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN5O00501 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC14.82□□□□□ -0.04
CLDN5O00501 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN5O00501 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN5O00501 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN5O00501 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms