Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.28□□□□□ -0.28
CNIH4Q9P003 AC140658.4-201ENST00000561990 352 ntBASIC13.28□□□□□ -0.28
CNIH4Q9P003 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC13.28□□□□□ -0.28
CNIH4Q9P003 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.28□□□□□ -0.28
CNIH4Q9P003 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.28□□□□□ -0.28
CNIH4Q9P003 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.28□□□□□ -0.28
CNIH4Q9P003 AL157813.1-201ENST00000612996 587 ntBASIC13.28□□□□□ -0.28
CNIH4Q9P003 AP001505.2-201ENST00000616815 443 ntBASIC13.28□□□□□ -0.28
CNIH4Q9P003 CU633904.3-201ENST00000624042 1029 ntBASIC13.28□□□□□ -0.28
CNIH4Q9P003 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.28□□□□□ -0.28
CNIH4Q9P003 AC092299.1-201ENST00000632679 757 ntBASIC13.28□□□□□ -0.28
CNIH4Q9P003 AC138627.1-207ENST00000641560 1006 ntBASIC13.28□□□□□ -0.28
CNIH4Q9P003 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.28□□□□□ -0.28
CNIH4Q9P003 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNIH4Q9P003 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CNIH4Q9P003 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNIH4Q9P003 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CNIH4Q9P003 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNIH4Q9P003 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNIH4Q9P003 CICP20-201ENST00000443330 2801 ntBASIC13.28□□□□□ -0.28
CNIH4Q9P003 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNIH4Q9P003 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNIH4Q9P003 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNIH4Q9P003 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNIH4Q9P003 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.28□□□□□ -0.28
CNIH4Q9P003 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CNIH4Q9P003 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.28□□□□□ -0.28
CNIH4Q9P003 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CNIH4Q9P003 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CNIH4Q9P003 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.28□□□□□ -0.28
CNIH4Q9P003 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CNIH4Q9P003 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CNIH4Q9P003 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.27□□□□□ -0.28
CNIH4Q9P003 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CNIH4Q9P003 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.27□□□□□ -0.28
CNIH4Q9P003 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CNIH4Q9P003 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CNIH4Q9P003 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CNIH4Q9P003 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.27□□□□□ -0.28
CNIH4Q9P003 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.27□□□□□ -0.28
CNIH4Q9P003 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CNIH4Q9P003 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.27□□□□□ -0.28
CNIH4Q9P003 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CNIH4Q9P003 AC005562.1-201ENST00000583030 3219 ntBASIC13.27□□□□□ -0.28
CNIH4Q9P003 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CNIH4Q9P003 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.27□□□□□ -0.28
CNIH4Q9P003 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
CNIH4Q9P003 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNIH4Q9P003 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CNIH4Q9P003 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CNIH4Q9P003 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.27□□□□□ -0.29
CNIH4Q9P003 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CNIH4Q9P003 AL161932.2-201ENST00000435436 679 ntBASIC13.27□□□□□ -0.29
CNIH4Q9P003 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.27□□□□□ -0.29
CNIH4Q9P003 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CNIH4Q9P003 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.27□□□□□ -0.29
CNIH4Q9P003 POU5F1P2-201ENST00000521750 823 ntBASIC13.27□□□□□ -0.29
CNIH4Q9P003 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CNIH4Q9P003 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.27□□□□□ -0.29
CNIH4Q9P003 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
CNIH4Q9P003 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CNIH4Q9P003 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CNIH4Q9P003 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC13.27□□□□□ -0.29
CNIH4Q9P003 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CNIH4Q9P003 COL6A4P2-202ENST00000504443 2753 ntBASIC13.27□□□□□ -0.29
CNIH4Q9P003 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNIH4Q9P003 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CNIH4Q9P003 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.29
CNIH4Q9P003 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNIH4Q9P003 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNIH4Q9P003 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNIH4Q9P003 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNIH4Q9P003 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNIH4Q9P003 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CNIH4Q9P003 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CNIH4Q9P003 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNIH4Q9P003 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.27□□□□□ -0.29
CNIH4Q9P003 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNIH4Q9P003 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CNIH4Q9P003 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.27□□□□□ -0.29
CNIH4Q9P003 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNIH4Q9P003 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNIH4Q9P003 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNIH4Q9P003 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNIH4Q9P003 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNIH4Q9P003 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CNIH4Q9P003 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CNIH4Q9P003 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNIH4Q9P003 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CNIH4Q9P003 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNIH4Q9P003 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CNIH4Q9P003 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNIH4Q9P003 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNIH4Q9P003 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNIH4Q9P003 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNIH4Q9P003 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CNIH4Q9P003 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CNIH4Q9P003 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CNIH4Q9P003 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.26□□□□□ -0.29
CNIH4Q9P003 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms