Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RPAP1Q9BWH6 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 AC107918.4-201ENST00000641966 3141 ntBASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 AL928654.5-201ENST00000624831 2501 ntBASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 DPY19L2P5-201ENST00000456300 331 ntBASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 CR383656.3-201ENST00000551315 183 ntBASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 AC007952.4-201ENST00000573866 637 ntBASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 DBP-202ENST00000593500 712 ntTSL 2 BASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 AP000322.3-201ENST00000608665 388 ntBASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 AMT-256ENST00000638063 1783 ntTSL 5 BASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 GOLGA8EP-201ENST00000530246 1959 ntBASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RPAP1Q9BWH6 BAX-205ENST00000391871 687 ntTSL 5 BASIC17.03■□□□□ 0.32
RPAP1Q9BWH6 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC17.03■□□□□ 0.32
RPAP1Q9BWH6 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC17.03■□□□□ 0.32
RPAP1Q9BWH6 AC098934.1-203ENST00000442868 1262 ntBASIC17.03■□□□□ 0.32
RPAP1Q9BWH6 AL157792.1-201ENST00000488281 530 ntBASIC17.03■□□□□ 0.32
RPAP1Q9BWH6 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC17.03■□□□□ 0.32
RPAP1Q9BWH6 RNA5SP417-201ENST00000516459 108 ntBASIC17.03■□□□□ 0.32
RPAP1Q9BWH6 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC17.03■□□□□ 0.32
RPAP1Q9BWH6 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPAP1Q9BWH6 AP003398.1-201ENST00000531124 318 ntBASIC17.03■□□□□ 0.32
RPAP1Q9BWH6 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPAP1Q9BWH6 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC17.03■□□□□ 0.32
RPAP1Q9BWH6 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC17.03■□□□□ 0.32
RPAP1Q9BWH6 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC17.03■□□□□ 0.32
RPAP1Q9BWH6 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC17.03■□□□□ 0.32
RPAP1Q9BWH6 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RPAP1Q9BWH6 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPAP1Q9BWH6 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RPAP1Q9BWH6 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC17.03■□□□□ 0.32
RPAP1Q9BWH6 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPAP1Q9BWH6 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPAP1Q9BWH6 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC17.03■□□□□ 0.32
RPAP1Q9BWH6 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPAP1Q9BWH6 API5-208ENST00000531273 1868 ntTSL 2 BASIC17.03■□□□□ 0.32
RPAP1Q9BWH6 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RPAP1Q9BWH6 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
RPAP1Q9BWH6 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC17.03■□□□□ 0.32
RPAP1Q9BWH6 AC020658.7-201ENST00000624274 2442 ntBASIC17.03■□□□□ 0.32
RPAP1Q9BWH6 GALC-206ENST00000544807 2528 ntTSL 2 BASIC17.03■□□□□ 0.32
RPAP1Q9BWH6 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC17.03■□□□□ 0.32
RPAP1Q9BWH6 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RPAP1Q9BWH6 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RPAP1Q9BWH6 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RPAP1Q9BWH6 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPAP1Q9BWH6 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RPAP1Q9BWH6 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 RN7SKP109-201ENST00000410592 316 ntBASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 HMGA1P1-201ENST00000415560 1062 ntBASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 PPP1R2P4-201ENST00000424051 595 ntBASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 AC018638.5-201ENST00000450885 754 ntBASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 TEKT4P2-202ENST00000559466 1312 ntBASIC17.02■□□□□ 0.32
RPAP1Q9BWH6 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms