Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 MBP-201ENST00000354542 575 ntTSL 2 BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 RPL8P2-201ENST00000430538 502 ntBASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 MIR4722-201ENST00000578292 60 ntBASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 NAT9-220ENST00000582870 896 ntTSL 5 BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 SPCS2P2-201ENST00000603270 608 ntBASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.1□□□□□ -0.47
CLDND2Q8NHS1 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 AC019294.4-201ENST00000561777 2905 ntBASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 AC118758.2-201ENST00000614242 2813 ntBASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 RNA5SP359-201ENST00000364838 113 ntBASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 AL627231.1-201ENST00000394467 1125 ntBASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 AC069218.1-201ENST00000435269 762 ntBASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 NEU3-205ENST00000531619 582 ntTSL 5 BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 AC103691.2-201ENST00000618824 433 ntBASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
CLDND2Q8NHS1 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
CLDND2Q8NHS1 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
CLDND2Q8NHS1 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
CLDND2Q8NHS1 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.47
CLDND2Q8NHS1 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CLDND2Q8NHS1 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CLDND2Q8NHS1 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
CLDND2Q8NHS1 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CLDND2Q8NHS1 AC020658.7-201ENST00000624274 2442 ntBASIC12.08□□□□□ -0.48
CLDND2Q8NHS1 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CLDND2Q8NHS1 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CLDND2Q8NHS1 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CLDND2Q8NHS1 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CLDND2Q8NHS1 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CLDND2Q8NHS1 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.08□□□□□ -0.48
CLDND2Q8NHS1 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms