Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC168Q8NDH2 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC168Q8NDH2 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC168Q8NDH2 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
CCDC168Q8NDH2 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC11.68□□□□□ -0.54
CCDC168Q8NDH2 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC168Q8NDH2 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC168Q8NDH2 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC168Q8NDH2 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC168Q8NDH2 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC11.68□□□□□ -0.54
CCDC168Q8NDH2 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC168Q8NDH2 RFNG-202ENST00000429557 994 ntTSL 5 BASIC11.68□□□□□ -0.54
CCDC168Q8NDH2 AC004910.1-201ENST00000433493 787 ntBASIC11.68□□□□□ -0.54
CCDC168Q8NDH2 MDH2-205ENST00000461263 648 ntTSL 2 BASIC11.68□□□□□ -0.54
CCDC168Q8NDH2 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
CCDC168Q8NDH2 PMM2-216ENST00000569958 698 ntTSL 2 BASIC11.68□□□□□ -0.54
CCDC168Q8NDH2 MIR4459-201ENST00000581837 66 ntBASIC11.68□□□□□ -0.54
CCDC168Q8NDH2 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC168Q8NDH2 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC11.68□□□□□ -0.54
CCDC168Q8NDH2 MIR6165-201ENST00000614803 84 ntBASIC11.68□□□□□ -0.54
CCDC168Q8NDH2 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
CCDC168Q8NDH2 AL162727.3-201ENST00000635661 2787 ntBASIC11.68□□□□□ -0.54
CCDC168Q8NDH2 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC168Q8NDH2 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC11.68□□□□□ -0.54
CCDC168Q8NDH2 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC168Q8NDH2 CCT8L1P-201ENST00000465400 1674 ntBASIC11.68□□□□□ -0.54
CCDC168Q8NDH2 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC168Q8NDH2 ABCB4-201ENST00000265723 4020 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC168Q8NDH2 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC168Q8NDH2 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
CCDC168Q8NDH2 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
CCDC168Q8NDH2 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC11.68□□□□□ -0.54
CCDC168Q8NDH2 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CCDC168Q8NDH2 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC11.68□□□□□ -0.54
CCDC168Q8NDH2 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
CCDC168Q8NDH2 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC11.68□□□□□ -0.54
CCDC168Q8NDH2 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 SLC36A1-211ENST00000616007 1389 ntTSL 2 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 RNA5SP491-201ENST00000362936 118 ntBASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 RPL10P8-201ENST00000522888 313 ntBASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 AC132825.4-202ENST00000578792 434 ntBASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 AC002511.3-201ENST00000638098 420 ntBASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 DKFZP434H168-201ENST00000567381 1905 ntBASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 GSN-206ENST00000394353 2311 ntTSL 2 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 S100A7A-202ENST00000368728 440 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 AL121949.1-201ENST00000402043 968 ntBASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 MPV17-209ENST00000405983 859 ntTSL 5 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 PGK1P2-201ENST00000431702 1214 ntBASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 VDAC1P11-201ENST00000458323 852 ntBASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 ALG10-202ENST00000538927 571 ntTSL 5 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 CMC2-204ENST00000562713 573 ntTSL 3 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 CMC2-209ENST00000565108 399 ntTSL 2 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC11.67□□□□□ -0.54
CCDC168Q8NDH2 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms