Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.04■□□□□ -0
RNF135Q8IUD6 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
RNF135Q8IUD6 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF135Q8IUD6 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
RNF135Q8IUD6 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC15.04■□□□□ -0
RNF135Q8IUD6 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.04■□□□□ -0
RNF135Q8IUD6 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.04■□□□□ -0
RNF135Q8IUD6 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.04■□□□□ -0
RNF135Q8IUD6 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.04■□□□□ -0
RNF135Q8IUD6 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC15.04■□□□□ -0
RNF135Q8IUD6 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC15.04■□□□□ -0
RNF135Q8IUD6 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RNF135Q8IUD6 ACTG1P19-201ENST00000418987 1116 ntBASIC15.04■□□□□ -0
RNF135Q8IUD6 CSNK1G2P1-201ENST00000442675 955 ntBASIC15.04■□□□□ -0
RNF135Q8IUD6 AC063952.3-201ENST00000467756 308 ntBASIC15.04■□□□□ -0
RNF135Q8IUD6 AC226150.1-201ENST00000544259 466 ntBASIC15.04■□□□□ -0
RNF135Q8IUD6 PTPN20CP-201ENST00000614090 920 ntBASIC15.04■□□□□ -0
RNF135Q8IUD6 MIR6746-201ENST00000620971 63 ntBASIC15.04■□□□□ -0
RNF135Q8IUD6 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.04■□□□□ -0
RNF135Q8IUD6 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF135Q8IUD6 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC15.04■□□□□ -0
RNF135Q8IUD6 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.04■□□□□ -0
RNF135Q8IUD6 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
RNF135Q8IUD6 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.04■□□□□ -0
RNF135Q8IUD6 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF135Q8IUD6 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF135Q8IUD6 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF135Q8IUD6 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.04■□□□□ -0
RNF135Q8IUD6 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.04■□□□□ -0
RNF135Q8IUD6 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.04■□□□□ -0
RNF135Q8IUD6 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RNF135Q8IUD6 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.04■□□□□ -0
RNF135Q8IUD6 AC092135.3-201ENST00000624151 1846 ntBASIC15.03■□□□□ -0
RNF135Q8IUD6 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.03■□□□□ -0
RNF135Q8IUD6 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.03■□□□□ -0
RNF135Q8IUD6 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.03■□□□□ -0
RNF135Q8IUD6 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.03■□□□□ -0
RNF135Q8IUD6 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RNF135Q8IUD6 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RNF135Q8IUD6 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RNF135Q8IUD6 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RNF135Q8IUD6 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RNF135Q8IUD6 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
RNF135Q8IUD6 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RNF135Q8IUD6 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.03■□□□□ -0
RNF135Q8IUD6 FTX-216ENST00000638985 1367 ntTSL 5 BASIC15.03■□□□□ -0
RNF135Q8IUD6 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RNF135Q8IUD6 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC15.03■□□□□ -0
RNF135Q8IUD6 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC15.03■□□□□ -0
RNF135Q8IUD6 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC15.03■□□□□ -0
RNF135Q8IUD6 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RNF135Q8IUD6 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC15.03■□□□□ -0
RNF135Q8IUD6 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC15.03■□□□□ -0
RNF135Q8IUD6 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC15.03■□□□□ -0
RNF135Q8IUD6 AC083801.1-201ENST00000491689 358 ntBASIC15.03■□□□□ -0
RNF135Q8IUD6 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC15.03■□□□□ -0
RNF135Q8IUD6 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
RNF135Q8IUD6 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC15.03■□□□□ -0
RNF135Q8IUD6 AC233280.19-201ENST00000633223 136 ntBASIC15.03■□□□□ -0
RNF135Q8IUD6 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RNF135Q8IUD6 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.03■□□□□ -0
RNF135Q8IUD6 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.03■□□□□ -0
RNF135Q8IUD6 AP001267.2-201ENST00000532619 2086 ntBASIC15.03■□□□□ -0
RNF135Q8IUD6 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
RNF135Q8IUD6 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RNF135Q8IUD6 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.03■□□□□ -0
RNF135Q8IUD6 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.03■□□□□ -0
RNF135Q8IUD6 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC15.03■□□□□ -0
RNF135Q8IUD6 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
RNF135Q8IUD6 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.03■□□□□ -0
RNF135Q8IUD6 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RNF135Q8IUD6 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RNF135Q8IUD6 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.03■□□□□ -0
RNF135Q8IUD6 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
RNF135Q8IUD6 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RNF135Q8IUD6 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RNF135Q8IUD6 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RNF135Q8IUD6 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RNF135Q8IUD6 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.02■□□□□ -0
RNF135Q8IUD6 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.02■□□□□ -0
RNF135Q8IUD6 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
RNF135Q8IUD6 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.02■□□□□ -0
RNF135Q8IUD6 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.02■□□□□ -0
RNF135Q8IUD6 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.02■□□□□ -0
RNF135Q8IUD6 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC15.02■□□□□ -0
RNF135Q8IUD6 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
RNF135Q8IUD6 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RNF135Q8IUD6 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RNF135Q8IUD6 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
RNF135Q8IUD6 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RNF135Q8IUD6 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
RNF135Q8IUD6 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RNF135Q8IUD6 AC006504.5-208ENST00000588784 2401 ntBASIC15.02■□□□□ -0
RNF135Q8IUD6 API5-208ENST00000531273 1868 ntTSL 2 BASIC15.02■□□□□ -0
RNF135Q8IUD6 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RNF135Q8IUD6 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC15.02■□□□□ -0
RNF135Q8IUD6 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RNF135Q8IUD6 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC15.02■□□□□ -0
RNF135Q8IUD6 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC15.02■□□□□ -0
RNF135Q8IUD6 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms