Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC9.49□□□□□ -0.89
SCXQ7RTU7 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC9.49□□□□□ -0.89
SCXQ7RTU7 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SCXQ7RTU7 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
SCXQ7RTU7 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC9.49□□□□□ -0.89
SCXQ7RTU7 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC9.49□□□□□ -0.89
SCXQ7RTU7 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC9.49□□□□□ -0.89
SCXQ7RTU7 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
SCXQ7RTU7 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
SCXQ7RTU7 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SCXQ7RTU7 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
SCXQ7RTU7 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC9.49□□□□□ -0.89
SCXQ7RTU7 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SCXQ7RTU7 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SCXQ7RTU7 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SCXQ7RTU7 SMS-201ENST00000379404 1174 ntTSL 3 BASIC9.49□□□□□ -0.89
SCXQ7RTU7 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SCXQ7RTU7 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SCXQ7RTU7 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC9.49□□□□□ -0.89
SCXQ7RTU7 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
SCXQ7RTU7 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC9.49□□□□□ -0.89
SCXQ7RTU7 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC9.49□□□□□ -0.89
SCXQ7RTU7 AC016700.1-201ENST00000429424 312 ntBASIC9.49□□□□□ -0.89
SCXQ7RTU7 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SCXQ7RTU7 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC9.49□□□□□ -0.89
SCXQ7RTU7 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SCXQ7RTU7 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC9.49□□□□□ -0.89
SCXQ7RTU7 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC9.49□□□□□ -0.89
SCXQ7RTU7 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC9.49□□□□□ -0.89
SCXQ7RTU7 RNA5SP423-201ENST00000517127 109 ntBASIC9.49□□□□□ -0.89
SCXQ7RTU7 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SCXQ7RTU7 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
SCXQ7RTU7 RERG-205ENST00000537647 935 ntTSL 2 BASIC9.49□□□□□ -0.89
SCXQ7RTU7 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC9.49□□□□□ -0.89
SCXQ7RTU7 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SCXQ7RTU7 KLK3-207ENST00000595952 969 ntTSL 3 BASIC9.49□□□□□ -0.89
SCXQ7RTU7 AC091544.8-201ENST00000619490 361 ntBASIC9.49□□□□□ -0.89
SCXQ7RTU7 AL023803.2-201ENST00000620080 638 ntBASIC9.49□□□□□ -0.89
SCXQ7RTU7 AC002472.3-201ENST00000640124 621 ntBASIC9.49□□□□□ -0.89
SCXQ7RTU7 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SCXQ7RTU7 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SCXQ7RTU7 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC9.49□□□□□ -0.89
SCXQ7RTU7 ST6GAL2-201ENST00000361686 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SCXQ7RTU7 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
SCXQ7RTU7 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
SCXQ7RTU7 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SCXQ7RTU7 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC9.49□□□□□ -0.89
SCXQ7RTU7 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SCXQ7RTU7 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SCXQ7RTU7 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC9.49□□□□□ -0.89
SCXQ7RTU7 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC9.49□□□□□ -0.89
SCXQ7RTU7 MAPT-IT1-201ENST00000624111 3016 ntBASIC9.49□□□□□ -0.89
SCXQ7RTU7 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
SCXQ7RTU7 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC9.49□□□□□ -0.89
SCXQ7RTU7 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC9.49□□□□□ -0.89
SCXQ7RTU7 AC011474.4-201ENST00000623523 2076 ntBASIC9.49□□□□□ -0.89
SCXQ7RTU7 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
SCXQ7RTU7 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC9.49□□□□□ -0.89
SCXQ7RTU7 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
SCXQ7RTU7 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC9.49□□□□□ -0.89
SCXQ7RTU7 ATAD5-201ENST00000321990 6869 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SCXQ7RTU7 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SCXQ7RTU7 SLC6A6P1-201ENST00000413933 1850 ntBASIC9.49□□□□□ -0.89
SCXQ7RTU7 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC9.49□□□□□ -0.89
SCXQ7RTU7 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SCXQ7RTU7 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC9.49□□□□□ -0.89
SCXQ7RTU7 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SCXQ7RTU7 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC9.49□□□□□ -0.89
SCXQ7RTU7 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SCXQ7RTU7 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
SCXQ7RTU7 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SCXQ7RTU7 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC9.48□□□□□ -0.89
SCXQ7RTU7 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SCXQ7RTU7 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
SCXQ7RTU7 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SCXQ7RTU7 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
SCXQ7RTU7 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC9.48□□□□□ -0.89
SCXQ7RTU7 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
SCXQ7RTU7 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
SCXQ7RTU7 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SCXQ7RTU7 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC9.48□□□□□ -0.89
SCXQ7RTU7 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
SCXQ7RTU7 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SCXQ7RTU7 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SCXQ7RTU7 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
SCXQ7RTU7 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC9.48□□□□□ -0.89
SCXQ7RTU7 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC9.48□□□□□ -0.89
SCXQ7RTU7 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SCXQ7RTU7 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC9.48□□□□□ -0.89
SCXQ7RTU7 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SCXQ7RTU7 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC9.48□□□□□ -0.89
SCXQ7RTU7 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
SCXQ7RTU7 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
SCXQ7RTU7 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
SCXQ7RTU7 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SCXQ7RTU7 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SCXQ7RTU7 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC9.48□□□□□ -0.89
SCXQ7RTU7 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SCXQ7RTU7 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SCXQ7RTU7 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC9.48□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms