Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
CCDC144NLQ6NUI1 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
CCDC144NLQ6NUI1 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC11.53□□□□□ -0.56
CCDC144NLQ6NUI1 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
CCDC144NLQ6NUI1 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CCDC144NLQ6NUI1 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CCDC144NLQ6NUI1 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
CCDC144NLQ6NUI1 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC11.53□□□□□ -0.56
CCDC144NLQ6NUI1 AC090643.2-201ENST00000623442 2029 ntBASIC11.53□□□□□ -0.56
CCDC144NLQ6NUI1 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CCDC144NLQ6NUI1 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CCDC144NLQ6NUI1 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CCDC144NLQ6NUI1 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CCDC144NLQ6NUI1 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CCDC144NLQ6NUI1 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC11.53□□□□□ -0.56
CCDC144NLQ6NUI1 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC11.53□□□□□ -0.56
CCDC144NLQ6NUI1 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CCDC144NLQ6NUI1 AC041040.2-201ENST00000622926 2899 ntBASIC11.53□□□□□ -0.56
CCDC144NLQ6NUI1 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CCDC144NLQ6NUI1 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CCDC144NLQ6NUI1 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CCDC144NLQ6NUI1 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
CCDC144NLQ6NUI1 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
CCDC144NLQ6NUI1 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CCDC144NLQ6NUI1 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC11.52□□□□□ -0.56
CCDC144NLQ6NUI1 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
CCDC144NLQ6NUI1 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
CCDC144NLQ6NUI1 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
CCDC144NLQ6NUI1 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
CCDC144NLQ6NUI1 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC11.52□□□□□ -0.56
CCDC144NLQ6NUI1 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CCDC144NLQ6NUI1 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
CCDC144NLQ6NUI1 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
CCDC144NLQ6NUI1 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
CCDC144NLQ6NUI1 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC11.52□□□□□ -0.56
CCDC144NLQ6NUI1 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 EML1-203ENST00000334192 4064 ntTSL 5 BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 LBH-202ENST00000401506 485 ntTSL 3 BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 AC006987.1-201ENST00000413610 527 ntBASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 KRTAP19-9P-201ENST00000421795 191 ntBASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 ISCA2P1-201ENST00000425548 448 ntBASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 AL133466.1-201ENST00000447582 150 ntBASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 CHCHD2P2-201ENST00000503744 321 ntBASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 RN7SL774P-201ENST00000577467 290 ntBASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 KRT18P8-201ENST00000581937 1246 ntBASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 IRF3-215ENST00000596822 823 ntTSL 3 BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 GPR182-203ENST00000622922 591 ntBASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 LINC01165-201ENST00000445190 1623 ntBASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC11.52□□□□□ -0.57
CCDC144NLQ6NUI1 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC11.51□□□□□ -0.57
CCDC144NLQ6NUI1 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CCDC144NLQ6NUI1 AMT-256ENST00000638063 1783 ntTSL 5 BASIC11.51□□□□□ -0.57
CCDC144NLQ6NUI1 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC11.51□□□□□ -0.57
CCDC144NLQ6NUI1 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
CCDC144NLQ6NUI1 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CCDC144NLQ6NUI1 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
CCDC144NLQ6NUI1 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC11.51□□□□□ -0.57
CCDC144NLQ6NUI1 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CCDC144NLQ6NUI1 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CCDC144NLQ6NUI1 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CCDC144NLQ6NUI1 KRT8P24-201ENST00000560290 1559 ntBASIC11.51□□□□□ -0.57
CCDC144NLQ6NUI1 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CCDC144NLQ6NUI1 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms