Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 SNRPCP15-201ENST00000424055 192 ntBASIC17.35■□□□□ 0.37
RC3H1Q5TC82 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 METTL7AP1-201ENST00000547343 496 ntBASIC17.35■□□□□ 0.37
RC3H1Q5TC82 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 AC133555.4-201ENST00000569081 152 ntBASIC17.35■□□□□ 0.37
RC3H1Q5TC82 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 RN7SL440P-201ENST00000577855 343 ntBASIC17.35■□□□□ 0.37
RC3H1Q5TC82 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 EML1-203ENST00000334192 4064 ntTSL 5 BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 RCC2P5-201ENST00000492126 1487 ntBASIC17.35■□□□□ 0.37
RC3H1Q5TC82 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
RC3H1Q5TC82 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RC3H1Q5TC82 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC17.34■□□□□ 0.37
RC3H1Q5TC82 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RC3H1Q5TC82 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RC3H1Q5TC82 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RC3H1Q5TC82 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RC3H1Q5TC82 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RC3H1Q5TC82 CCL25-202ENST00000315626 450 ntTSL 2 BASIC17.34■□□□□ 0.37
RC3H1Q5TC82 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RC3H1Q5TC82 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RC3H1Q5TC82 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RC3H1Q5TC82 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RC3H1Q5TC82 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC17.34■□□□□ 0.37
RC3H1Q5TC82 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC17.34■□□□□ 0.37
RC3H1Q5TC82 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RC3H1Q5TC82 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.34■□□□□ 0.37
RC3H1Q5TC82 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC17.34■□□□□ 0.37
RC3H1Q5TC82 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC17.34■□□□□ 0.37
RC3H1Q5TC82 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RC3H1Q5TC82 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC17.34■□□□□ 0.37
RC3H1Q5TC82 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RC3H1Q5TC82 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC17.34■□□□□ 0.37
RC3H1Q5TC82 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RC3H1Q5TC82 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
RC3H1Q5TC82 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC17.34■□□□□ 0.37
RC3H1Q5TC82 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC17.34■□□□□ 0.37
RC3H1Q5TC82 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC17.34■□□□□ 0.37
RC3H1Q5TC82 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC17.34■□□□□ 0.37
RC3H1Q5TC82 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RC3H1Q5TC82 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RC3H1Q5TC82 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC17.34■□□□□ 0.37
RC3H1Q5TC82 AC245140.2-201ENST00000624054 1939 ntBASIC17.34■□□□□ 0.37
RC3H1Q5TC82 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RC3H1Q5TC82 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RC3H1Q5TC82 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RC3H1Q5TC82 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RC3H1Q5TC82 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RC3H1Q5TC82 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RC3H1Q5TC82 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
RC3H1Q5TC82 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
RC3H1Q5TC82 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RC3H1Q5TC82 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RC3H1Q5TC82 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC17.33■□□□□ 0.37
RC3H1Q5TC82 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
RC3H1Q5TC82 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
RC3H1Q5TC82 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
RC3H1Q5TC82 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RC3H1Q5TC82 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms