Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC15.03■□□□□ -0
VARS2Q5ST30 RN7SL357P-201ENST00000581065 298 ntBASIC15.03■□□□□ -0
VARS2Q5ST30 AP001527.2-201ENST00000614441 631 ntBASIC15.03■□□□□ -0
VARS2Q5ST30 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC15.03■□□□□ -0
VARS2Q5ST30 OR6C71P-202ENST00000641886 1107 ntBASIC15.03■□□□□ -0
VARS2Q5ST30 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.03■□□□□ -0
VARS2Q5ST30 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC15.03■□□□□ -0
VARS2Q5ST30 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.03■□□□□ -0
VARS2Q5ST30 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
VARS2Q5ST30 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VARS2Q5ST30 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
VARS2Q5ST30 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.03■□□□□ -0
VARS2Q5ST30 LINC00552-201ENST00000625151 2579 ntBASIC15.03■□□□□ -0
VARS2Q5ST30 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.03■□□□□ -0
VARS2Q5ST30 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.03■□□□□ -0
VARS2Q5ST30 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.03■□□□□ -0
VARS2Q5ST30 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.03■□□□□ -0
VARS2Q5ST30 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC15.03■□□□□ -0
VARS2Q5ST30 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
VARS2Q5ST30 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.03■□□□□ -0
VARS2Q5ST30 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.02■□□□□ -0
VARS2Q5ST30 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VARS2Q5ST30 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.02■□□□□ -0
VARS2Q5ST30 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
VARS2Q5ST30 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VARS2Q5ST30 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.02■□□□□ -0
VARS2Q5ST30 FCAR-203ENST00000355524 1483 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
VARS2Q5ST30 KRT8P43-201ENST00000406052 1458 ntBASIC15.02■□□□□ -0
VARS2Q5ST30 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC15.02■□□□□ -0
VARS2Q5ST30 AC008033.3-201ENST00000612531 1407 ntBASIC15.02■□□□□ -0
VARS2Q5ST30 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VARS2Q5ST30 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VARS2Q5ST30 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VARS2Q5ST30 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.02■□□□□ -0
VARS2Q5ST30 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC15.02■□□□□ -0
VARS2Q5ST30 AL590824.1-201ENST00000403828 1349 ntBASIC15.02■□□□□ -0
VARS2Q5ST30 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VARS2Q5ST30 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
VARS2Q5ST30 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
VARS2Q5ST30 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VARS2Q5ST30 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VARS2Q5ST30 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC15.02■□□□□ -0
VARS2Q5ST30 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VARS2Q5ST30 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC15.02■□□□□ -0
VARS2Q5ST30 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
VARS2Q5ST30 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC15.02■□□□□ -0
VARS2Q5ST30 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC15.02■□□□□ -0
VARS2Q5ST30 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
VARS2Q5ST30 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
VARS2Q5ST30 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC15.02■□□□□ -0
VARS2Q5ST30 AC022616.2-201ENST00000523185 300 ntBASIC15.02■□□□□ -0
VARS2Q5ST30 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
VARS2Q5ST30 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC15.02■□□□□ -0
VARS2Q5ST30 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
VARS2Q5ST30 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
VARS2Q5ST30 AL021368.1-201ENST00000607490 540 ntBASIC15.02■□□□□ -0
VARS2Q5ST30 AL132780.4-201ENST00000624870 1135 ntBASIC15.02■□□□□ -0
VARS2Q5ST30 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
VARS2Q5ST30 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
VARS2Q5ST30 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
VARS2Q5ST30 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC15.02□□□□□ -0.01
VARS2Q5ST30 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
VARS2Q5ST30 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.02□□□□□ -0.01
VARS2Q5ST30 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
VARS2Q5ST30 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
VARS2Q5ST30 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
VARS2Q5ST30 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.02□□□□□ -0.01
VARS2Q5ST30 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
VARS2Q5ST30 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
VARS2Q5ST30 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
VARS2Q5ST30 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VARS2Q5ST30 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VARS2Q5ST30 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VARS2Q5ST30 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
VARS2Q5ST30 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VARS2Q5ST30 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VARS2Q5ST30 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
VARS2Q5ST30 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC15.01□□□□□ -0.01
VARS2Q5ST30 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
VARS2Q5ST30 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
VARS2Q5ST30 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.01□□□□□ -0.01
VARS2Q5ST30 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
VARS2Q5ST30 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.01□□□□□ -0.01
VARS2Q5ST30 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
VARS2Q5ST30 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VARS2Q5ST30 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VARS2Q5ST30 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VARS2Q5ST30 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
VARS2Q5ST30 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VARS2Q5ST30 PSG5-207ENST00000407568 1064 ntTSL 2 BASIC15.01□□□□□ -0.01
VARS2Q5ST30 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC15.01□□□□□ -0.01
VARS2Q5ST30 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC15.01□□□□□ -0.01
VARS2Q5ST30 HSFY4P-201ENST00000415994 1181 ntBASIC15.01□□□□□ -0.01
VARS2Q5ST30 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC15.01□□□□□ -0.01
VARS2Q5ST30 SFR1P2-201ENST00000421841 730 ntBASIC15.01□□□□□ -0.01
VARS2Q5ST30 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC15.01□□□□□ -0.01
VARS2Q5ST30 GRPEL2P1-201ENST00000453145 339 ntBASIC15.01□□□□□ -0.01
VARS2Q5ST30 RN7SL767P-201ENST00000493013 295 ntBASIC15.01□□□□□ -0.01
VARS2Q5ST30 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC15.01□□□□□ -0.01
VARS2Q5ST30 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms