Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCDH1Q08174 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCDH1Q08174 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
PCDH1Q08174 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCDH1Q08174 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
PCDH1Q08174 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PCDH1Q08174 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCDH1Q08174 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PCDH1Q08174 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCDH1Q08174 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCDH1Q08174 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCDH1Q08174 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.65□□□□□ -0.22
PCDH1Q08174 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCDH1Q08174 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCDH1Q08174 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCDH1Q08174 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
PCDH1Q08174 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC13.65□□□□□ -0.22
PCDH1Q08174 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.65□□□□□ -0.22
PCDH1Q08174 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PCDH1Q08174 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC13.65□□□□□ -0.22
PCDH1Q08174 PFN1P12-201ENST00000455938 534 ntBASIC13.65□□□□□ -0.22
PCDH1Q08174 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.65□□□□□ -0.22
PCDH1Q08174 RN7SL530P-201ENST00000485097 298 ntBASIC13.65□□□□□ -0.22
PCDH1Q08174 RCC2P8-201ENST00000502779 1035 ntBASIC13.65□□□□□ -0.22
PCDH1Q08174 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.65□□□□□ -0.22
PCDH1Q08174 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCDH1Q08174 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.65□□□□□ -0.22
PCDH1Q08174 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC13.65□□□□□ -0.22
PCDH1Q08174 RN7SL455P-201ENST00000580629 282 ntBASIC13.65□□□□□ -0.22
PCDH1Q08174 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.65□□□□□ -0.22
PCDH1Q08174 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
PCDH1Q08174 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
PCDH1Q08174 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PCDH1Q08174 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
PCDH1Q08174 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.65□□□□□ -0.22
PCDH1Q08174 KRT8P21-201ENST00000430398 1491 ntBASIC13.65□□□□□ -0.22
PCDH1Q08174 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.65□□□□□ -0.22
PCDH1Q08174 AL139158.3-201ENST00000641212 1562 ntBASIC13.65□□□□□ -0.22
PCDH1Q08174 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCDH1Q08174 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCDH1Q08174 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCDH1Q08174 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCDH1Q08174 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.65□□□□□ -0.22
PCDH1Q08174 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.65□□□□□ -0.22
PCDH1Q08174 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.65□□□□□ -0.22
PCDH1Q08174 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
PCDH1Q08174 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCDH1Q08174 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCDH1Q08174 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
PCDH1Q08174 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PCDH1Q08174 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.64□□□□□ -0.23
PCDH1Q08174 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC13.64□□□□□ -0.23
PCDH1Q08174 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCDH1Q08174 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCDH1Q08174 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCDH1Q08174 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.64□□□□□ -0.23
PCDH1Q08174 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCDH1Q08174 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCDH1Q08174 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
PCDH1Q08174 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.64□□□□□ -0.23
PCDH1Q08174 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCDH1Q08174 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.64□□□□□ -0.23
PCDH1Q08174 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCDH1Q08174 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCDH1Q08174 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PCDH1Q08174 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCDH1Q08174 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCDH1Q08174 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC13.64□□□□□ -0.23
PCDH1Q08174 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCDH1Q08174 AC068760.1-201ENST00000493579 1953 ntBASIC13.64□□□□□ -0.23
PCDH1Q08174 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
PCDH1Q08174 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC13.64□□□□□ -0.23
PCDH1Q08174 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
PCDH1Q08174 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
PCDH1Q08174 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCDH1Q08174 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PCDH1Q08174 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PCDH1Q08174 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCDH1Q08174 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PCDH1Q08174 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCDH1Q08174 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.64□□□□□ -0.23
PCDH1Q08174 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.64□□□□□ -0.23
PCDH1Q08174 AC104306.2-201ENST00000451877 341 ntBASIC13.64□□□□□ -0.23
PCDH1Q08174 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.64□□□□□ -0.23
PCDH1Q08174 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PCDH1Q08174 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.64□□□□□ -0.23
PCDH1Q08174 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.64□□□□□ -0.23
PCDH1Q08174 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC13.64□□□□□ -0.23
PCDH1Q08174 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC13.64□□□□□ -0.23
PCDH1Q08174 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.64□□□□□ -0.23
PCDH1Q08174 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCDH1Q08174 AL645939.5-201ENST00000606834 243 ntBASIC13.64□□□□□ -0.23
PCDH1Q08174 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
PCDH1Q08174 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.64□□□□□ -0.23
PCDH1Q08174 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PCDH1Q08174 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PCDH1Q08174 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.64□□□□□ -0.23
PCDH1Q08174 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.64□□□□□ -0.23
PCDH1Q08174 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PCDH1Q08174 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms