Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
IRX4P78413 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
IRX4P78413 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
IRX4P78413 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
IRX4P78413 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
IRX4P78413 CICP8-201ENST00000455800 2813 ntBASIC14.85□□□□□ -0.03
IRX4P78413 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
IRX4P78413 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
IRX4P78413 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.85□□□□□ -0.03
IRX4P78413 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
IRX4P78413 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC14.85□□□□□ -0.03
IRX4P78413 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
IRX4P78413 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
IRX4P78413 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.85□□□□□ -0.03
IRX4P78413 AC090505.1-201ENST00000430515 1834 ntBASIC14.85□□□□□ -0.03
IRX4P78413 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
IRX4P78413 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
IRX4P78413 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
IRX4P78413 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
IRX4P78413 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
IRX4P78413 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
IRX4P78413 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
IRX4P78413 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
IRX4P78413 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
IRX4P78413 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
IRX4P78413 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
IRX4P78413 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
IRX4P78413 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
IRX4P78413 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
IRX4P78413 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
IRX4P78413 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
IRX4P78413 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
IRX4P78413 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
IRX4P78413 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
IRX4P78413 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
IRX4P78413 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
IRX4P78413 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC14.84□□□□□ -0.03
IRX4P78413 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
IRX4P78413 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
IRX4P78413 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
IRX4P78413 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.84□□□□□ -0.03
IRX4P78413 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
IRX4P78413 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
IRX4P78413 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC14.84□□□□□ -0.03
IRX4P78413 ISCA2P1-201ENST00000425548 448 ntBASIC14.84□□□□□ -0.03
IRX4P78413 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.84□□□□□ -0.03
IRX4P78413 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC14.84□□□□□ -0.03
IRX4P78413 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC14.84□□□□□ -0.03
IRX4P78413 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC14.84□□□□□ -0.03
IRX4P78413 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
IRX4P78413 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
IRX4P78413 CFL1-206ENST00000527344 962 ntTSL 2 BASIC14.84□□□□□ -0.03
IRX4P78413 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC14.84□□□□□ -0.03
IRX4P78413 PGAM1P5-201ENST00000548011 764 ntBASIC14.84□□□□□ -0.03
IRX4P78413 AL160314.3-201ENST00000556041 767 ntBASIC14.84□□□□□ -0.03
IRX4P78413 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.84□□□□□ -0.03
IRX4P78413 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
IRX4P78413 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
IRX4P78413 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
IRX4P78413 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
IRX4P78413 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
IRX4P78413 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
IRX4P78413 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
IRX4P78413 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
IRX4P78413 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.84□□□□□ -0.03
IRX4P78413 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
IRX4P78413 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.84□□□□□ -0.03
IRX4P78413 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
IRX4P78413 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
IRX4P78413 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
IRX4P78413 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
IRX4P78413 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
IRX4P78413 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
IRX4P78413 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
IRX4P78413 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
IRX4P78413 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
IRX4P78413 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
IRX4P78413 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
IRX4P78413 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
IRX4P78413 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.03
IRX4P78413 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
IRX4P78413 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
IRX4P78413 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
IRX4P78413 MIR193BHG-211ENST00000641433 5365 ntBASIC14.83□□□□□ -0.03
IRX4P78413 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
IRX4P78413 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.83□□□□□ -0.04
IRX4P78413 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
IRX4P78413 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
IRX4P78413 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.83□□□□□ -0.04
IRX4P78413 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.83□□□□□ -0.04
IRX4P78413 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.83□□□□□ -0.04
IRX4P78413 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
IRX4P78413 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
IRX4P78413 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
IRX4P78413 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
IRX4P78413 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
IRX4P78413 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
IRX4P78413 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
IRX4P78413 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC14.83□□□□□ -0.04
IRX4P78413 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms