Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC13.3□□□□□ -0.28
TRA2BP62995 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRA2BP62995 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRA2BP62995 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRA2BP62995 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.3□□□□□ -0.28
TRA2BP62995 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TRA2BP62995 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.3□□□□□ -0.28
TRA2BP62995 FAM86MP-201ENST00000340703 885 ntBASIC13.3□□□□□ -0.28
TRA2BP62995 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRA2BP62995 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRA2BP62995 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRA2BP62995 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRA2BP62995 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC13.3□□□□□ -0.28
TRA2BP62995 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC13.3□□□□□ -0.28
TRA2BP62995 BANF1P3-201ENST00000412556 261 ntBASIC13.3□□□□□ -0.28
TRA2BP62995 LINC00265-2P-201ENST00000413372 782 ntBASIC13.3□□□□□ -0.28
TRA2BP62995 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRA2BP62995 DNAJB1P1-201ENST00000429417 1024 ntBASIC13.3□□□□□ -0.28
TRA2BP62995 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC13.3□□□□□ -0.28
TRA2BP62995 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.3□□□□□ -0.28
TRA2BP62995 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC13.3□□□□□ -0.28
TRA2BP62995 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC13.3□□□□□ -0.28
TRA2BP62995 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRA2BP62995 SCARNA20.5-201ENST00000516991 142 ntBASIC13.3□□□□□ -0.28
TRA2BP62995 ALG1L13P-202ENST00000519320 584 ntBASIC13.3□□□□□ -0.28
TRA2BP62995 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC13.3□□□□□ -0.28
TRA2BP62995 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC13.3□□□□□ -0.28
TRA2BP62995 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
TRA2BP62995 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.3□□□□□ -0.28
TRA2BP62995 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
TRA2BP62995 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.3□□□□□ -0.28
TRA2BP62995 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC13.3□□□□□ -0.28
TRA2BP62995 AC243960.2-201ENST00000600996 747 ntBASIC13.3□□□□□ -0.28
TRA2BP62995 AL021707.6-201ENST00000609212 491 ntBASIC13.3□□□□□ -0.28
TRA2BP62995 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.3□□□□□ -0.28
TRA2BP62995 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRA2BP62995 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRA2BP62995 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRA2BP62995 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
TRA2BP62995 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRA2BP62995 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
TRA2BP62995 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TRA2BP62995 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TRA2BP62995 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRA2BP62995 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRA2BP62995 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRA2BP62995 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
TRA2BP62995 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.3□□□□□ -0.28
TRA2BP62995 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TRA2BP62995 AC015909.3-201ENST00000572855 1794 ntBASIC13.3□□□□□ -0.28
TRA2BP62995 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC13.3□□□□□ -0.28
TRA2BP62995 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRA2BP62995 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.3□□□□□ -0.28
TRA2BP62995 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRA2BP62995 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRA2BP62995 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRA2BP62995 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.3□□□□□ -0.28
TRA2BP62995 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
TRA2BP62995 DDC-214ENST00000622873 1839 ntTSL 3 BASIC13.29□□□□□ -0.28
TRA2BP62995 AF013593.1-201ENST00000458074 1487 ntBASIC13.29□□□□□ -0.28
TRA2BP62995 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC13.29□□□□□ -0.28
TRA2BP62995 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRA2BP62995 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRA2BP62995 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRA2BP62995 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
TRA2BP62995 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRA2BP62995 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRA2BP62995 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRA2BP62995 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC13.29□□□□□ -0.28
TRA2BP62995 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRA2BP62995 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TRA2BP62995 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRA2BP62995 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRA2BP62995 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRA2BP62995 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC13.29□□□□□ -0.28
TRA2BP62995 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRA2BP62995 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRA2BP62995 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRA2BP62995 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
TRA2BP62995 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TRA2BP62995 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRA2BP62995 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRA2BP62995 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRA2BP62995 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRA2BP62995 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRA2BP62995 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
TRA2BP62995 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRA2BP62995 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.29□□□□□ -0.28
TRA2BP62995 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRA2BP62995 PPP1R2P4-201ENST00000424051 595 ntBASIC13.29□□□□□ -0.28
TRA2BP62995 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.29□□□□□ -0.28
TRA2BP62995 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
TRA2BP62995 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.29□□□□□ -0.28
TRA2BP62995 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRA2BP62995 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.29□□□□□ -0.28
TRA2BP62995 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.29□□□□□ -0.28
TRA2BP62995 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRA2BP62995 AC092658.1-201ENST00000505836 891 ntBASIC13.29□□□□□ -0.28
TRA2BP62995 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRA2BP62995 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms