Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SEC61A1P61619 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61A1P61619 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61A1P61619 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
SEC61A1P61619 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61A1P61619 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61A1P61619 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61A1P61619 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61A1P61619 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61A1P61619 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SEC61A1P61619 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC12.5□□□□□ -0.41
SEC61A1P61619 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61A1P61619 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC12.5□□□□□ -0.41
SEC61A1P61619 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61A1P61619 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61A1P61619 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61A1P61619 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61A1P61619 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61A1P61619 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61A1P61619 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.5□□□□□ -0.41
SEC61A1P61619 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC12.5□□□□□ -0.41
SEC61A1P61619 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.5□□□□□ -0.41
SEC61A1P61619 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SEC61A1P61619 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.5□□□□□ -0.41
SEC61A1P61619 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC12.5□□□□□ -0.41
SEC61A1P61619 AC007969.1-201ENST00000433675 447 ntBASIC12.5□□□□□ -0.41
SEC61A1P61619 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61A1P61619 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61A1P61619 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61A1P61619 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.5□□□□□ -0.41
SEC61A1P61619 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
SEC61A1P61619 PPY2P-201ENST00000582808 702 ntBASIC12.5□□□□□ -0.41
SEC61A1P61619 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61A1P61619 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.5□□□□□ -0.41
SEC61A1P61619 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC12.5□□□□□ -0.41
SEC61A1P61619 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC12.5□□□□□ -0.41
SEC61A1P61619 MIR6869-201ENST00000619434 62 ntBASIC12.5□□□□□ -0.41
SEC61A1P61619 AL603764.1-201ENST00000636452 321 ntBASIC12.5□□□□□ -0.41
SEC61A1P61619 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SEC61A1P61619 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61A1P61619 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61A1P61619 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.5□□□□□ -0.41
SEC61A1P61619 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC12.5□□□□□ -0.41
SEC61A1P61619 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61A1P61619 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61A1P61619 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61A1P61619 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61A1P61619 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SEC61A1P61619 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.5□□□□□ -0.41
SEC61A1P61619 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
SEC61A1P61619 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61A1P61619 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61A1P61619 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61A1P61619 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61A1P61619 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61A1P61619 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.5□□□□□ -0.41
SEC61A1P61619 AC106818.1-201ENST00000623223 3242 ntBASIC12.5□□□□□ -0.41
SEC61A1P61619 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61A1P61619 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.5□□□□□ -0.41
SEC61A1P61619 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61A1P61619 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61A1P61619 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61A1P61619 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61A1P61619 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61A1P61619 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SEC61A1P61619 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SEC61A1P61619 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SEC61A1P61619 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SEC61A1P61619 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SEC61A1P61619 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SEC61A1P61619 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SEC61A1P61619 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
SEC61A1P61619 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SEC61A1P61619 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.49□□□□□ -0.41
SEC61A1P61619 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SEC61A1P61619 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SEC61A1P61619 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SEC61A1P61619 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SEC61A1P61619 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SEC61A1P61619 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SEC61A1P61619 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SEC61A1P61619 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SEC61A1P61619 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.49□□□□□ -0.41
SEC61A1P61619 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SEC61A1P61619 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SEC61A1P61619 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SEC61A1P61619 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.49□□□□□ -0.41
SEC61A1P61619 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SEC61A1P61619 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SEC61A1P61619 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SEC61A1P61619 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SEC61A1P61619 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SEC61A1P61619 MTX1P1-201ENST00000440904 838 ntBASIC12.49□□□□□ -0.41
SEC61A1P61619 RPSAP36-202ENST00000494591 1261 ntBASIC12.49□□□□□ -0.41
SEC61A1P61619 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SEC61A1P61619 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.49□□□□□ -0.41
SEC61A1P61619 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.49□□□□□ -0.41
SEC61A1P61619 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
SEC61A1P61619 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
SEC61A1P61619 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms