Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
HIST1H2BDP58876 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 LINC02133-202ENST00000569726 2626 ntTSL 2 BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 NT5E-201ENST00000257770 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 TLE4-201ENST00000265284 2382 ntTSL 2 BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 PKM-222ENST00000568883 1863 ntTSL 5 BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 SCNN1A-203ENST00000360168 3481 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 ARL4A-203ENST00000396663 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 LDLRAD3-201ENST00000315571 3798 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 CEP83-201ENST00000339839 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 EXTL2-207ENST00000535414 3146 ntTSL 5 BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 CWC22-202ENST00000410053 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 HKR1-204ENST00000544914 2854 ntTSL 2 BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 AC009093.2-202ENST00000620513 2079 ntBASIC10.55□□□□□ -0.72
HIST1H2BDP58876 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 C19orf44-201ENST00000221671 3427 ntAPPRIS P3 TSL 2 BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 TNS2-210ENST00000549700 4525 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 OPRK1-206ENST00000613482 4682 ntTSL 5 BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 GOLGA2P1-201ENST00000512938 2906 ntBASIC10.55□□□□□ -0.72
HIST1H2BDP58876 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 GPRASP1-201ENST00000361600 5971 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 THSD1-201ENST00000258613 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 NRF1-201ENST00000223190 2424 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 AC093525.8-201ENST00000624099 1342 ntBASIC10.55□□□□□ -0.72
HIST1H2BDP58876 ZFP69B-201ENST00000361584 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 GDPD2-201ENST00000374382 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 BDNF-218ENST00000533246 4000 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
HIST1H2BDP58876 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 STAT3-213ENST00000588969 2772 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 OR2I1P-208ENST00000641137 4948 ntBASIC10.54□□□□□ -0.72
HIST1H2BDP58876 CENPP-201ENST00000375576 3088 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 ZNF701-204ENST00000540331 5538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 NUTM2B-202ENST00000372321 3970 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 STX16-202ENST00000355957 4897 ntTSL 2 BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 AC092117.2-201ENST00000623937 1659 ntBASIC10.54□□□□□ -0.72
HIST1H2BDP58876 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 CADM3-202ENST00000368125 3745 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 AL590428.1-201ENST00000428865 1973 ntTSL 2 BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 TSEN2-204ENST00000415684 2279 ntTSL 5 BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 DERL1-201ENST00000259512 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 ELN-201ENST00000252034 3781 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 SLC45A4-201ENST00000024061 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 C12orf74-201ENST00000397833 1856 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 CBR1-202ENST00000399191 838 ntTSL 3 BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 RCN1P1-201ENST00000400413 996 ntBASIC10.54□□□□□ -0.72
HIST1H2BDP58876 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 RAB17-203ENST00000409576 466 ntTSL 3 BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 POLD4-207ENST00000531239 584 ntTSL 2 BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 FICD-205ENST00000552758 603 ntTSL 2 BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 MAX-210ENST00000555419 765 ntTSL 5 BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 AC005586.2-201ENST00000563946 837 ntBASIC10.54□□□□□ -0.72
HIST1H2BDP58876 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC10.54□□□□□ -0.72
HIST1H2BDP58876 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC10.54□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms