Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 FTO-214ENST00000636218 2227 ntTSL 5 BASIC13.15□□□□□ -0.31
HTR3AP46098 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
HTR3AP46098 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
HTR3AP46098 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
HTR3AP46098 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.14□□□□□ -0.31
HTR3AP46098 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HTR3AP46098 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HTR3AP46098 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
HTR3AP46098 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HTR3AP46098 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.14□□□□□ -0.31
HTR3AP46098 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC13.14□□□□□ -0.31
HTR3AP46098 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HTR3AP46098 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HTR3AP46098 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.14□□□□□ -0.31
HTR3AP46098 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC13.14□□□□□ -0.31
HTR3AP46098 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
HTR3AP46098 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
HTR3AP46098 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
HTR3AP46098 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
HTR3AP46098 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HTR3AP46098 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.14□□□□□ -0.31
HTR3AP46098 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HTR3AP46098 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.14□□□□□ -0.31
HTR3AP46098 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HTR3AP46098 AC006122.1-201ENST00000493323 440 ntBASIC13.14□□□□□ -0.31
HTR3AP46098 FAM86HP-204ENST00000513466 959 ntBASIC13.14□□□□□ -0.31
HTR3AP46098 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.14□□□□□ -0.31
HTR3AP46098 AL583810.1-201ENST00000553344 1045 ntBASIC13.14□□□□□ -0.31
HTR3AP46098 AL160314.3-201ENST00000556041 767 ntBASIC13.14□□□□□ -0.31
HTR3AP46098 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.14□□□□□ -0.31
HTR3AP46098 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.14□□□□□ -0.31
HTR3AP46098 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.14□□□□□ -0.31
HTR3AP46098 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.14□□□□□ -0.31
HTR3AP46098 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.14□□□□□ -0.31
HTR3AP46098 AC005962.1-201ENST00000584100 773 ntBASIC13.14□□□□□ -0.31
HTR3AP46098 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.14□□□□□ -0.31
HTR3AP46098 AC005324.6-201ENST00000587972 613 ntBASIC13.14□□□□□ -0.31
HTR3AP46098 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
HTR3AP46098 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HTR3AP46098 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.14□□□□□ -0.31
HTR3AP46098 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.14□□□□□ -0.31
HTR3AP46098 AL136295.7-201ENST00000619226 1200 ntBASIC13.14□□□□□ -0.31
HTR3AP46098 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HTR3AP46098 AC090386.2-201ENST00000623010 1039 ntBASIC13.14□□□□□ -0.31
HTR3AP46098 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.14□□□□□ -0.31
HTR3AP46098 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC13.14□□□□□ -0.31
HTR3AP46098 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
HTR3AP46098 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.14□□□□□ -0.31
HTR3AP46098 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HTR3AP46098 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HTR3AP46098 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HTR3AP46098 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HTR3AP46098 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HTR3AP46098 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
HTR3AP46098 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HTR3AP46098 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HTR3AP46098 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.13□□□□□ -0.31
HTR3AP46098 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
HTR3AP46098 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HTR3AP46098 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HTR3AP46098 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.13□□□□□ -0.31
HTR3AP46098 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC13.13□□□□□ -0.31
HTR3AP46098 CICP1-201ENST00000416803 2410 ntBASIC13.13□□□□□ -0.31
HTR3AP46098 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HTR3AP46098 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
HTR3AP46098 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HTR3AP46098 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HTR3AP46098 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HTR3AP46098 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.13□□□□□ -0.31
HTR3AP46098 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HTR3AP46098 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HTR3AP46098 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
HTR3AP46098 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
HTR3AP46098 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HTR3AP46098 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
HTR3AP46098 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
HTR3AP46098 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HTR3AP46098 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.13□□□□□ -0.31
HTR3AP46098 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HTR3AP46098 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HTR3AP46098 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.13□□□□□ -0.31
HTR3AP46098 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.13□□□□□ -0.31
HTR3AP46098 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.13□□□□□ -0.31
HTR3AP46098 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.13□□□□□ -0.31
HTR3AP46098 KLF2P1-201ENST00000447438 1042 ntBASIC13.13□□□□□ -0.31
HTR3AP46098 RPL13AP20-201ENST00000459725 609 ntBASIC13.13□□□□□ -0.31
HTR3AP46098 FAM8A2P-201ENST00000528813 1142 ntBASIC13.13□□□□□ -0.31
HTR3AP46098 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.13□□□□□ -0.31
HTR3AP46098 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HTR3AP46098 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.13□□□□□ -0.31
HTR3AP46098 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.13□□□□□ -0.31
HTR3AP46098 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.13□□□□□ -0.31
HTR3AP46098 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.13□□□□□ -0.31
HTR3AP46098 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HTR3AP46098 AL365181.3-201ENST00000605886 3222 ntBASIC13.13□□□□□ -0.31
HTR3AP46098 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HTR3AP46098 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HTR3AP46098 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HTR3AP46098 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HTR3AP46098 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms