Protein–RNA interactions for Protein: P30260

CDC27, Cell division cycle protein 27 homolog, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27P30260 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CDC27P30260 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC27P30260 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC27P30260 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC27P30260 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDC27P30260 SNORA50C-201ENST00000408535 133 ntBASIC16.32■□□□□ 0.2
CDC27P30260 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDC27P30260 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC27P30260 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
CDC27P30260 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.32■□□□□ 0.2
CDC27P30260 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CDC27P30260 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC16.32■□□□□ 0.2
CDC27P30260 PPP1R2P4-201ENST00000424051 595 ntBASIC16.32■□□□□ 0.2
CDC27P30260 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC16.32■□□□□ 0.2
CDC27P30260 AP000358.1-201ENST00000456260 156 ntBASIC16.32■□□□□ 0.2
CDC27P30260 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.32■□□□□ 0.2
CDC27P30260 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDC27P30260 CD81-209ENST00000492627 886 ntTSL 3 BASIC16.32■□□□□ 0.2
CDC27P30260 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.32■□□□□ 0.2
CDC27P30260 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.32■□□□□ 0.2
CDC27P30260 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.32■□□□□ 0.2
CDC27P30260 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC16.32■□□□□ 0.2
CDC27P30260 CR383656.2-201ENST00000548656 2254 ntBASIC16.32■□□□□ 0.2
CDC27P30260 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC16.32■□□□□ 0.2
CDC27P30260 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.32■□□□□ 0.2
CDC27P30260 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.32■□□□□ 0.2
CDC27P30260 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.32■□□□□ 0.2
CDC27P30260 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.32■□□□□ 0.2
CDC27P30260 FGFR3P5-201ENST00000564496 886 ntBASIC16.32■□□□□ 0.2
CDC27P30260 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC16.32■□□□□ 0.2
CDC27P30260 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.32■□□□□ 0.2
CDC27P30260 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CDC27P30260 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.32■□□□□ 0.2
CDC27P30260 AL161773.1-201ENST00000624845 863 ntBASIC16.32■□□□□ 0.2
CDC27P30260 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDC27P30260 SNORA50.1-201ENST00000628590 135 ntBASIC16.32■□□□□ 0.2
CDC27P30260 CMC2-224ENST00000630396 481 ntTSL 5 BASIC16.32■□□□□ 0.2
CDC27P30260 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CDC27P30260 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC16.32■□□□□ 0.2
CDC27P30260 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CDC27P30260 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDC27P30260 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC27P30260 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC27P30260 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDC27P30260 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDC27P30260 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CDC27P30260 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC27P30260 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC27P30260 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC27P30260 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC16.31■□□□□ 0.2
CDC27P30260 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC27P30260 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDC27P30260 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC16.31■□□□□ 0.2
CDC27P30260 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.31■□□□□ 0.2
CDC27P30260 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC27P30260 ABCD1P2-201ENST00000429313 1601 ntBASIC16.31■□□□□ 0.2
CDC27P30260 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC16.31■□□□□ 0.2
CDC27P30260 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CDC27P30260 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC27P30260 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CDC27P30260 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC16.31■□□□□ 0.2
CDC27P30260 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC27P30260 AL807761.2-201ENST00000422849 729 ntBASIC16.31■□□□□ 0.2
CDC27P30260 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.31■□□□□ 0.2
CDC27P30260 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CDC27P30260 AC022494.1-201ENST00000466044 728 ntBASIC16.31■□□□□ 0.2
CDC27P30260 IMP3P2-201ENST00000489760 475 ntBASIC16.31■□□□□ 0.2
CDC27P30260 AC245884.6-201ENST00000515672 1067 ntBASIC16.31■□□□□ 0.2
CDC27P30260 NAA40-205ENST00000539656 577 ntTSL 4 BASIC16.31■□□□□ 0.2
CDC27P30260 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.31■□□□□ 0.2
CDC27P30260 AL133499.1-201ENST00000596207 608 ntBASIC16.31■□□□□ 0.2
CDC27P30260 AC007326.1-201ENST00000604539 458 ntBASIC16.31■□□□□ 0.2
CDC27P30260 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC16.31■□□□□ 0.2
CDC27P30260 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CDC27P30260 AC009145.4-201ENST00000625119 1294 ntBASIC16.31■□□□□ 0.2
CDC27P30260 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC27P30260 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDC27P30260 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC16.31■□□□□ 0.2
CDC27P30260 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CDC27P30260 AC005252.3-201ENST00000623855 2258 ntBASIC16.31■□□□□ 0.2
CDC27P30260 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC27P30260 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDC27P30260 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CDC27P30260 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CDC27P30260 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CDC27P30260 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CDC27P30260 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC27P30260 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDC27P30260 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC16.31■□□□□ 0.2
CDC27P30260 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.31■□□□□ 0.2
CDC27P30260 DDC-204ENST00000426377 1700 ntTSL 3 BASIC16.31■□□□□ 0.2
CDC27P30260 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
CDC27P30260 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC27P30260 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC27P30260 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC27P30260 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC27P30260 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC27P30260 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDC27P30260 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC27P30260 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms