Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RXRBP28702 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RXRBP28702 CST2-201ENST00000304725 748 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RXRBP28702 AC073316.2-201ENST00000414126 418 ntTSL 2 BASIC17.87■□□□□ 0.45
RXRBP28702 B3GALNT1-204ENST00000417187 1107 ntTSL 2 BASIC17.87■□□□□ 0.45
RXRBP28702 C3orf18-202ENST00000422619 551 ntTSL 4 BASIC17.87■□□□□ 0.45
RXRBP28702 COL18A1-AS2-201ENST00000446475 552 ntTSL 4 BASIC17.87■□□□□ 0.45
RXRBP28702 AC145285.1-201ENST00000469929 694 ntBASIC17.87■□□□□ 0.45
RXRBP28702 AC138781.1-201ENST00000501322 505 ntTSL 3 BASIC17.87■□□□□ 0.45
RXRBP28702 OCIAD1-226ENST00000513391 1288 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RXRBP28702 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC17.87■□□□□ 0.45
RXRBP28702 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.87■□□□□ 0.45
RXRBP28702 FKBP4P1-201ENST00000507284 1347 ntBASIC17.87■□□□□ 0.45
RXRBP28702 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC17.87■□□□□ 0.45
RXRBP28702 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.87■□□□□ 0.45
RXRBP28702 AL162727.3-201ENST00000635661 2787 ntBASIC17.87■□□□□ 0.45
RXRBP28702 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
RXRBP28702 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RXRBP28702 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RXRBP28702 CDC20P1-201ENST00000488829 1500 ntBASIC17.87■□□□□ 0.45
RXRBP28702 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RXRBP28702 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RXRBP28702 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RXRBP28702 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
RXRBP28702 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RXRBP28702 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
RXRBP28702 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
RXRBP28702 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RXRBP28702 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
RXRBP28702 FBXO39-201ENST00000321535 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RXRBP28702 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RXRBP28702 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC17.86■□□□□ 0.45
RXRBP28702 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RXRBP28702 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RXRBP28702 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.86■□□□□ 0.45
RXRBP28702 AC020658.6-201ENST00000623564 1870 ntBASIC17.86■□□□□ 0.45
RXRBP28702 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RXRBP28702 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RXRBP28702 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RXRBP28702 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RXRBP28702 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RXRBP28702 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.86■□□□□ 0.45
RXRBP28702 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RXRBP28702 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
RXRBP28702 PBDC1-202ENST00000373358 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RXRBP28702 HBD-202ENST00000380299 785 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RXRBP28702 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC17.86■□□□□ 0.45
RXRBP28702 AC010601.1-201ENST00000569048 446 ntTSL 5 BASIC17.86■□□□□ 0.45
RXRBP28702 MIR4539-201ENST00000579784 60 ntBASIC17.86■□□□□ 0.45
RXRBP28702 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RXRBP28702 RTP2-201ENST00000358241 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RXRBP28702 TUBB4AP1-201ENST00000450755 1325 ntBASIC17.86■□□□□ 0.45
RXRBP28702 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC17.86■□□□□ 0.45
RXRBP28702 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.86■□□□□ 0.45
RXRBP28702 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RXRBP28702 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RXRBP28702 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.86■□□□□ 0.45
RXRBP28702 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.86■□□□□ 0.45
RXRBP28702 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RXRBP28702 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RXRBP28702 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RXRBP28702 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RXRBP28702 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RXRBP28702 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RXRBP28702 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RXRBP28702 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RXRBP28702 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RXRBP28702 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.85■□□□□ 0.45
RXRBP28702 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RXRBP28702 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RXRBP28702 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RXRBP28702 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.85■□□□□ 0.45
RXRBP28702 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
RXRBP28702 KRTAP10-10-201ENST00000380095 1100 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
RXRBP28702 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RXRBP28702 MBL3P-201ENST00000402234 644 ntBASIC17.85■□□□□ 0.45
RXRBP28702 AC013269.2-201ENST00000422631 727 ntTSL 2 BASIC17.85■□□□□ 0.45
RXRBP28702 PLA2G6-213ENST00000447598 567 ntTSL 5 BASIC17.85■□□□□ 0.45
RXRBP28702 AL391822.1-201ENST00000452580 562 ntBASIC17.85■□□□□ 0.45
RXRBP28702 AC140481.2-201ENST00000457169 695 ntTSL 2 BASIC17.85■□□□□ 0.45
RXRBP28702 NBR2-202ENST00000460115 1344 ntTSL 2 BASIC17.85■□□□□ 0.45
RXRBP28702 AC025178.1-201ENST00000503441 834 ntTSL 2 BASIC17.85■□□□□ 0.45
RXRBP28702 LINC01194-203ENST00000513051 670 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RXRBP28702 AP003108.1-201ENST00000534856 554 ntTSL 4 BASIC17.85■□□□□ 0.45
RXRBP28702 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RXRBP28702 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC17.85■□□□□ 0.45
RXRBP28702 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RXRBP28702 LINC00662-204ENST00000588027 562 ntTSL 5 BASIC17.85■□□□□ 0.45
RXRBP28702 AC244102.2-201ENST00000597568 955 ntBASIC17.85■□□□□ 0.45
RXRBP28702 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
RXRBP28702 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.85■□□□□ 0.45
RXRBP28702 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RXRBP28702 SLC26A5-203ENST00000354356 2686 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
RXRBP28702 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RXRBP28702 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RXRBP28702 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RXRBP28702 MAFTRR-201ENST00000562921 1859 ntTSL 5 BASIC17.84■□□□□ 0.45
RXRBP28702 CDCA7L-202ENST00000373934 1830 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RXRBP28702 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC17.84■□□□□ 0.45
RXRBP28702 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms