Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB3BP20337 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
RAB3BP20337 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB3BP20337 AC008620.2-201ENST00000510294 1569 ntBASIC12.45□□□□□ -0.42
RAB3BP20337 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
RAB3BP20337 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB3BP20337 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB3BP20337 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
RAB3BP20337 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.45□□□□□ -0.42
RAB3BP20337 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.45□□□□□ -0.42
RAB3BP20337 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC12.45□□□□□ -0.42
RAB3BP20337 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB3BP20337 KRT18P15-201ENST00000458108 1291 ntBASIC12.45□□□□□ -0.42
RAB3BP20337 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC12.45□□□□□ -0.42
RAB3BP20337 AC004890.2-204ENST00000481968 304 ntBASIC12.45□□□□□ -0.42
RAB3BP20337 AC022137.2-201ENST00000503482 481 ntBASIC12.45□□□□□ -0.42
RAB3BP20337 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.45□□□□□ -0.42
RAB3BP20337 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.45□□□□□ -0.42
RAB3BP20337 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.45□□□□□ -0.42
RAB3BP20337 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.45□□□□□ -0.42
RAB3BP20337 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC12.45□□□□□ -0.42
RAB3BP20337 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.45□□□□□ -0.42
RAB3BP20337 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC12.45□□□□□ -0.42
RAB3BP20337 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
RAB3BP20337 AL390754.1-201ENST00000619088 582 ntBASIC12.45□□□□□ -0.42
RAB3BP20337 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.45□□□□□ -0.42
RAB3BP20337 AC134684.3-201ENST00000641758 218 ntBASIC12.45□□□□□ -0.42
RAB3BP20337 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RAB3BP20337 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
RAB3BP20337 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RAB3BP20337 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC12.45□□□□□ -0.42
RAB3BP20337 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB3BP20337 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB3BP20337 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB3BP20337 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC12.45□□□□□ -0.42
RAB3BP20337 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB3BP20337 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB3BP20337 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC12.45□□□□□ -0.42
RAB3BP20337 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB3BP20337 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
RAB3BP20337 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
RAB3BP20337 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.45□□□□□ -0.42
RAB3BP20337 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RAB3BP20337 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB3BP20337 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC12.45□□□□□ -0.42
RAB3BP20337 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RAB3BP20337 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB3BP20337 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB3BP20337 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RAB3BP20337 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RAB3BP20337 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.45□□□□□ -0.42
RAB3BP20337 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB3BP20337 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
RAB3BP20337 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RAB3BP20337 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC12.44□□□□□ -0.42
RAB3BP20337 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB3BP20337 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB3BP20337 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB3BP20337 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB3BP20337 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RAB3BP20337 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
RAB3BP20337 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RAB3BP20337 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.44□□□□□ -0.42
RAB3BP20337 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC12.44□□□□□ -0.42
RAB3BP20337 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RAB3BP20337 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RAB3BP20337 AL645937.6-201ENST00000641122 3727 ntBASIC12.44□□□□□ -0.42
RAB3BP20337 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB3BP20337 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
RAB3BP20337 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.44□□□□□ -0.42
RAB3BP20337 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.44□□□□□ -0.42
RAB3BP20337 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB3BP20337 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
RAB3BP20337 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RAB3BP20337 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB3BP20337 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB3BP20337 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB3BP20337 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC12.44□□□□□ -0.42
RAB3BP20337 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RAB3BP20337 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC12.44□□□□□ -0.42
RAB3BP20337 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RAB3BP20337 AC093433.1-201ENST00000458048 571 ntBASIC12.44□□□□□ -0.42
RAB3BP20337 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RAB3BP20337 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.44□□□□□ -0.42
RAB3BP20337 AC093004.1-201ENST00000508850 424 ntBASIC12.44□□□□□ -0.42
RAB3BP20337 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC12.44□□□□□ -0.42
RAB3BP20337 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RAB3BP20337 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.44□□□□□ -0.42
RAB3BP20337 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC12.44□□□□□ -0.42
RAB3BP20337 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.44□□□□□ -0.42
RAB3BP20337 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.44□□□□□ -0.42
RAB3BP20337 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.44□□□□□ -0.42
RAB3BP20337 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC12.44□□□□□ -0.42
RAB3BP20337 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RAB3BP20337 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
RAB3BP20337 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
RAB3BP20337 AC027369.3-201ENST00000530465 3707 ntBASIC12.44□□□□□ -0.42
RAB3BP20337 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB3BP20337 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RAB3BP20337 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms