Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATF3P18847 AC011477.7-201ENST00000617163 1440 ntBASIC18.95■□□□□ 0.62
ATF3P18847 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.95■□□□□ 0.62
ATF3P18847 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATF3P18847 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC18.95■□□□□ 0.62
ATF3P18847 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC18.95■□□□□ 0.62
ATF3P18847 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC18.95■□□□□ 0.62
ATF3P18847 AC104115.1-201ENST00000484005 623 ntBASIC18.95■□□□□ 0.62
ATF3P18847 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC18.95■□□□□ 0.62
ATF3P18847 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATF3P18847 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC18.95■□□□□ 0.62
ATF3P18847 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC18.95■□□□□ 0.62
ATF3P18847 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC18.95■□□□□ 0.62
ATF3P18847 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATF3P18847 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC18.95■□□□□ 0.62
ATF3P18847 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
ATF3P18847 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATF3P18847 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
ATF3P18847 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATF3P18847 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATF3P18847 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATF3P18847 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
ATF3P18847 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
ATF3P18847 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATF3P18847 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATF3P18847 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATF3P18847 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
ATF3P18847 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATF3P18847 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC18.94■□□□□ 0.62
ATF3P18847 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.94■□□□□ 0.62
ATF3P18847 NRADDP-202ENST00000641269 1585 ntBASIC18.94■□□□□ 0.62
ATF3P18847 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
ATF3P18847 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATF3P18847 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATF3P18847 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATF3P18847 OR7E12P-201ENST00000344740 973 ntBASIC18.94■□□□□ 0.62
ATF3P18847 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
ATF3P18847 RPSAP16-201ENST00000447583 821 ntBASIC18.94■□□□□ 0.62
ATF3P18847 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC18.94■□□□□ 0.62
ATF3P18847 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC18.94■□□□□ 0.62
ATF3P18847 METTL7AP1-201ENST00000547343 496 ntBASIC18.94■□□□□ 0.62
ATF3P18847 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC18.94■□□□□ 0.62
ATF3P18847 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC18.94■□□□□ 0.62
ATF3P18847 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
ATF3P18847 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC18.94■□□□□ 0.62
ATF3P18847 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.94■□□□□ 0.62
ATF3P18847 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATF3P18847 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATF3P18847 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATF3P18847 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATF3P18847 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATF3P18847 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATF3P18847 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
ATF3P18847 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC18.94■□□□□ 0.62
ATF3P18847 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATF3P18847 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATF3P18847 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
ATF3P18847 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATF3P18847 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATF3P18847 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC18.93■□□□□ 0.62
ATF3P18847 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.93■□□□□ 0.62
ATF3P18847 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
ATF3P18847 NOS2P3-201ENST00000411468 867 ntBASIC18.93■□□□□ 0.62
ATF3P18847 RBMX2P5-201ENST00000424312 969 ntBASIC18.93■□□□□ 0.62
ATF3P18847 NOS2P2-201ENST00000426269 867 ntBASIC18.93■□□□□ 0.62
ATF3P18847 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC18.93■□□□□ 0.62
ATF3P18847 SRP9P1-201ENST00000445874 261 ntBASIC18.93■□□□□ 0.62
ATF3P18847 AC007279.1-201ENST00000448547 837 ntBASIC18.93■□□□□ 0.62
ATF3P18847 ALDOAP1-201ENST00000491506 1078 ntBASIC18.93■□□□□ 0.62
ATF3P18847 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATF3P18847 KRT18P42-201ENST00000505048 1255 ntBASIC18.93■□□□□ 0.62
ATF3P18847 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC18.93■□□□□ 0.62
ATF3P18847 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC18.93■□□□□ 0.62
ATF3P18847 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC18.93■□□□□ 0.62
ATF3P18847 AL031768.1-201ENST00000606542 701 ntBASIC18.93■□□□□ 0.62
ATF3P18847 AL109954.3-201ENST00000615088 558 ntBASIC18.93■□□□□ 0.62
ATF3P18847 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC18.93■□□□□ 0.62
ATF3P18847 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
ATF3P18847 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATF3P18847 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATF3P18847 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATF3P18847 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
ATF3P18847 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
ATF3P18847 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATF3P18847 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC18.93■□□□□ 0.62
ATF3P18847 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATF3P18847 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATF3P18847 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATF3P18847 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATF3P18847 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATF3P18847 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC18.93■□□□□ 0.62
ATF3P18847 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATF3P18847 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATF3P18847 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
ATF3P18847 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
ATF3P18847 DLX4-206ENST00000611342 1662 ntBASIC18.92■□□□□ 0.62
ATF3P18847 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATF3P18847 AC245140.2-201ENST00000624054 1939 ntBASIC18.92■□□□□ 0.62
ATF3P18847 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ATF3P18847 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms