Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.04□□□□□ -0.48
HIST1H1DP16402 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1DP16402 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.03□□□□□ -0.48
HIST1H1DP16402 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1DP16402 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.03□□□□□ -0.48
HIST1H1DP16402 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.03□□□□□ -0.48
HIST1H1DP16402 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.03□□□□□ -0.48
HIST1H1DP16402 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1DP16402 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
HIST1H1DP16402 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
HIST1H1DP16402 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.03□□□□□ -0.48
HIST1H1DP16402 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1DP16402 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1DP16402 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC12.03□□□□□ -0.48
HIST1H1DP16402 AC002350.2-201ENST00000623894 1828 ntBASIC12.03□□□□□ -0.48
HIST1H1DP16402 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1DP16402 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1DP16402 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1DP16402 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1DP16402 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1DP16402 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1DP16402 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.03□□□□□ -0.48
HIST1H1DP16402 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1DP16402 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.03□□□□□ -0.48
HIST1H1DP16402 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC12.03□□□□□ -0.48
HIST1H1DP16402 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.03□□□□□ -0.48
HIST1H1DP16402 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.03□□□□□ -0.48
HIST1H1DP16402 AC022217.1-201ENST00000521069 738 ntBASIC12.03□□□□□ -0.48
HIST1H1DP16402 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC12.03□□□□□ -0.48
HIST1H1DP16402 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC12.03□□□□□ -0.48
HIST1H1DP16402 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1DP16402 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.03□□□□□ -0.48
HIST1H1DP16402 LINC02560-201ENST00000596379 459 ntBASIC12.03□□□□□ -0.48
HIST1H1DP16402 AL591471.1-201ENST00000621855 229 ntBASIC12.03□□□□□ -0.48
HIST1H1DP16402 AC138951.2-201ENST00000623455 1161 ntBASIC12.03□□□□□ -0.48
HIST1H1DP16402 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
HIST1H1DP16402 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1DP16402 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1DP16402 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1DP16402 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1DP16402 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1DP16402 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1DP16402 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1DP16402 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1DP16402 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.03□□□□□ -0.48
HIST1H1DP16402 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1DP16402 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1DP16402 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1DP16402 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
HIST1H1DP16402 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.03□□□□□ -0.48
HIST1H1DP16402 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1DP16402 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1DP16402 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1DP16402 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1DP16402 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1DP16402 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
HIST1H1DP16402 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1DP16402 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
HIST1H1DP16402 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HIST1H1DP16402 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
HIST1H1DP16402 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.03□□□□□ -0.48
HIST1H1DP16402 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC12.03□□□□□ -0.48
HIST1H1DP16402 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.03□□□□□ -0.48
HIST1H1DP16402 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
HIST1H1DP16402 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
HIST1H1DP16402 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
HIST1H1DP16402 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
HIST1H1DP16402 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
HIST1H1DP16402 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
HIST1H1DP16402 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
HIST1H1DP16402 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
HIST1H1DP16402 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.02□□□□□ -0.48
HIST1H1DP16402 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.02□□□□□ -0.48
HIST1H1DP16402 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
HIST1H1DP16402 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
HIST1H1DP16402 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HIST1H1DP16402 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
HIST1H1DP16402 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HIST1H1DP16402 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HIST1H1DP16402 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
HIST1H1DP16402 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
HIST1H1DP16402 AC092933.1-201ENST00000393644 945 ntBASIC12.02□□□□□ -0.49
HIST1H1DP16402 PIN1P1-201ENST00000412108 996 ntBASIC12.02□□□□□ -0.49
HIST1H1DP16402 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.02□□□□□ -0.49
HIST1H1DP16402 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.02□□□□□ -0.49
HIST1H1DP16402 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.02□□□□□ -0.49
HIST1H1DP16402 CHMP1AP1-201ENST00000445563 662 ntBASIC12.02□□□□□ -0.49
HIST1H1DP16402 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
HIST1H1DP16402 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
HIST1H1DP16402 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HIST1H1DP16402 TP53TG3HP-202ENST00000569755 579 ntBASIC12.02□□□□□ -0.49
HIST1H1DP16402 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.02□□□□□ -0.49
HIST1H1DP16402 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC12.02□□□□□ -0.49
HIST1H1DP16402 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC12.02□□□□□ -0.49
HIST1H1DP16402 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.02□□□□□ -0.49
HIST1H1DP16402 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
HIST1H1DP16402 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HIST1H1DP16402 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
HIST1H1DP16402 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.02□□□□□ -0.49
HIST1H1DP16402 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms