Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HTR1AP08908 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HTR1AP08908 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HTR1AP08908 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HTR1AP08908 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HTR1AP08908 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HTR1AP08908 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HTR1AP08908 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
HTR1AP08908 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HTR1AP08908 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
HTR1AP08908 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HTR1AP08908 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
HTR1AP08908 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HTR1AP08908 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HTR1AP08908 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HTR1AP08908 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HTR1AP08908 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HTR1AP08908 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HTR1AP08908 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HTR1AP08908 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HTR1AP08908 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
HTR1AP08908 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.92□□□□□ -0.34
HTR1AP08908 SNORA50C-201ENST00000408535 133 ntBASIC12.92□□□□□ -0.34
HTR1AP08908 MRPS18AP1-201ENST00000414458 589 ntBASIC12.92□□□□□ -0.34
HTR1AP08908 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.92□□□□□ -0.34
HTR1AP08908 METTL21AP1-201ENST00000438852 635 ntBASIC12.92□□□□□ -0.34
HTR1AP08908 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HTR1AP08908 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HTR1AP08908 AC092552.1-201ENST00000547243 906 ntBASIC12.92□□□□□ -0.34
HTR1AP08908 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC12.92□□□□□ -0.34
HTR1AP08908 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
HTR1AP08908 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC12.92□□□□□ -0.34
HTR1AP08908 SNORA50.1-201ENST00000628590 135 ntBASIC12.92□□□□□ -0.34
HTR1AP08908 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HTR1AP08908 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HTR1AP08908 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
HTR1AP08908 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC12.92□□□□□ -0.34
HTR1AP08908 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
HTR1AP08908 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.92□□□□□ -0.34
HTR1AP08908 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HTR1AP08908 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HTR1AP08908 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HTR1AP08908 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
HTR1AP08908 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HTR1AP08908 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC12.92□□□□□ -0.34
HTR1AP08908 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
HTR1AP08908 AC011700.1-201ENST00000610409 2627 ntBASIC12.92□□□□□ -0.34
HTR1AP08908 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HTR1AP08908 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HTR1AP08908 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HTR1AP08908 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC12.91□□□□□ -0.34
HTR1AP08908 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HTR1AP08908 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.91□□□□□ -0.34
HTR1AP08908 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
HTR1AP08908 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
HTR1AP08908 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
HTR1AP08908 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HTR1AP08908 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.91□□□□□ -0.34
HTR1AP08908 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC12.91□□□□□ -0.34
HTR1AP08908 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
HTR1AP08908 SHC1P1-201ENST00000425230 1745 ntBASIC12.91□□□□□ -0.34
HTR1AP08908 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.91□□□□□ -0.34
HTR1AP08908 PXK-210ENST00000479241 2817 ntTSL 2 BASIC12.91□□□□□ -0.34
HTR1AP08908 AC134407.3-201ENST00000624035 2139 ntBASIC12.91□□□□□ -0.34
HTR1AP08908 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HTR1AP08908 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.91□□□□□ -0.34
HTR1AP08908 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HTR1AP08908 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HTR1AP08908 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.91□□□□□ -0.34
HTR1AP08908 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
HTR1AP08908 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HTR1AP08908 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.91□□□□□ -0.34
HTR1AP08908 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HTR1AP08908 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.91□□□□□ -0.34
HTR1AP08908 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HTR1AP08908 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC12.91□□□□□ -0.34
HTR1AP08908 BASP1P1-201ENST00000430708 665 ntBASIC12.91□□□□□ -0.34
HTR1AP08908 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HTR1AP08908 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HTR1AP08908 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.91□□□□□ -0.34
HTR1AP08908 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.91□□□□□ -0.34
HTR1AP08908 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.91□□□□□ -0.34
HTR1AP08908 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.91□□□□□ -0.34
HTR1AP08908 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC12.91□□□□□ -0.34
HTR1AP08908 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC12.91□□□□□ -0.34
HTR1AP08908 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.91□□□□□ -0.34
HTR1AP08908 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC12.91□□□□□ -0.34
HTR1AP08908 AC005252.2-201ENST00000624630 1141 ntBASIC12.91□□□□□ -0.34
HTR1AP08908 AC009093.2-202ENST00000620513 2079 ntBASIC12.91□□□□□ -0.34
HTR1AP08908 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HTR1AP08908 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC12.91□□□□□ -0.34
HTR1AP08908 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HTR1AP08908 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
HTR1AP08908 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HTR1AP08908 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC12.91□□□□□ -0.34
HTR1AP08908 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.91□□□□□ -0.34
HTR1AP08908 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC12.91□□□□□ -0.34
HTR1AP08908 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HTR1AP08908 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
HTR1AP08908 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms