Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.78□□□□□ -0.04
RB1P06400 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.78□□□□□ -0.04
RB1P06400 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.78□□□□□ -0.04
RB1P06400 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.78□□□□□ -0.04
RB1P06400 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RB1P06400 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RB1P06400 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RB1P06400 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RB1P06400 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RB1P06400 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RB1P06400 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RB1P06400 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RB1P06400 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RB1P06400 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.77□□□□□ -0.04
RB1P06400 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.77□□□□□ -0.04
RB1P06400 MYO15B-237ENST00000642007 4893 ntBASIC14.77□□□□□ -0.04
RB1P06400 LILRP2-202ENST00000413572 1383 ntBASIC14.77□□□□□ -0.04
RB1P06400 AL022313.4-201ENST00000562756 2046 ntBASIC14.77□□□□□ -0.04
RB1P06400 AC068760.1-201ENST00000493579 1953 ntBASIC14.77□□□□□ -0.04
RB1P06400 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RB1P06400 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RB1P06400 GH1-203ENST00000351388 685 ntTSL 2 BASIC14.77□□□□□ -0.05
RB1P06400 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC14.77□□□□□ -0.05
RB1P06400 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC14.77□□□□□ -0.05
RB1P06400 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC14.77□□□□□ -0.05
RB1P06400 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC14.77□□□□□ -0.05
RB1P06400 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC14.77□□□□□ -0.05
RB1P06400 AC091304.3-201ENST00000566500 716 ntBASIC14.77□□□□□ -0.05
RB1P06400 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC14.77□□□□□ -0.05
RB1P06400 MIR4326-201ENST00000582203 59 ntBASIC14.77□□□□□ -0.05
RB1P06400 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC14.77□□□□□ -0.05
RB1P06400 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC14.77□□□□□ -0.05
RB1P06400 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC14.77□□□□□ -0.05
RB1P06400 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC14.77□□□□□ -0.05
RB1P06400 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC14.77□□□□□ -0.05
RB1P06400 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.77□□□□□ -0.05
RB1P06400 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.77□□□□□ -0.05
RB1P06400 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RB1P06400 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RB1P06400 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RB1P06400 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RB1P06400 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RB1P06400 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RB1P06400 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RB1P06400 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.77□□□□□ -0.05
RB1P06400 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RB1P06400 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RB1P06400 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
RB1P06400 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
RB1P06400 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC14.76□□□□□ -0.05
RB1P06400 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RB1P06400 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.76□□□□□ -0.05
RB1P06400 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RB1P06400 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RB1P06400 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RB1P06400 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RB1P06400 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RB1P06400 RN7SL832P-201ENST00000607781 1756 ntBASIC14.76□□□□□ -0.05
RB1P06400 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RB1P06400 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RB1P06400 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
RB1P06400 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RB1P06400 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
RB1P06400 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RB1P06400 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RB1P06400 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RB1P06400 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
RB1P06400 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
RB1P06400 OR7E155P-201ENST00000412208 1014 ntBASIC14.76□□□□□ -0.05
RB1P06400 AC136604.1-202ENST00000425471 771 ntBASIC14.76□□□□□ -0.05
RB1P06400 ZNF877P-201ENST00000437614 612 ntBASIC14.76□□□□□ -0.05
RB1P06400 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC14.76□□□□□ -0.05
RB1P06400 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC14.76□□□□□ -0.05
RB1P06400 AC079250.1-201ENST00000456046 531 ntBASIC14.76□□□□□ -0.05
RB1P06400 AC104212.2-201ENST00000478813 628 ntBASIC14.76□□□□□ -0.05
RB1P06400 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC14.76□□□□□ -0.05
RB1P06400 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC14.76□□□□□ -0.05
RB1P06400 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC14.76□□□□□ -0.05
RB1P06400 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC14.76□□□□□ -0.05
RB1P06400 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC14.76□□□□□ -0.05
RB1P06400 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC14.76□□□□□ -0.05
RB1P06400 RN7SL524P-201ENST00000581152 300 ntBASIC14.76□□□□□ -0.05
RB1P06400 AC006116.2-201ENST00000589958 988 ntBASIC14.76□□□□□ -0.05
RB1P06400 PRMT1P1-201ENST00000604252 1009 ntBASIC14.76□□□□□ -0.05
RB1P06400 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
RB1P06400 MEP1AP1-201ENST00000636082 1097 ntBASIC14.76□□□□□ -0.05
RB1P06400 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RB1P06400 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RB1P06400 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RB1P06400 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RB1P06400 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RB1P06400 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RB1P06400 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RB1P06400 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RB1P06400 AC023824.1-201ENST00000562945 2975 ntBASIC14.76□□□□□ -0.05
RB1P06400 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
RB1P06400 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RB1P06400 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RB1P06400 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RB1P06400 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms