Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CLIC4Q9Y696 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
CLIC4Q9Y696 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.74■■□□□ 1.71
CLIC4Q9Y696 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CLIC4Q9Y696 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
CLIC4Q9Y696 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC25.74■■□□□ 1.71
CLIC4Q9Y696 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC25.73■■□□□ 1.71
CLIC4Q9Y696 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC25.73■■□□□ 1.71
CLIC4Q9Y696 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC25.73■■□□□ 1.71
CLIC4Q9Y696 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CLIC4Q9Y696 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC25.73■■□□□ 1.71
CLIC4Q9Y696 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CLIC4Q9Y696 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.72■■□□□ 1.71
CLIC4Q9Y696 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.72■■□□□ 1.71
CLIC4Q9Y696 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CLIC4Q9Y696 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CLIC4Q9Y696 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CLIC4Q9Y696 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
CLIC4Q9Y696 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.72■■□□□ 1.71
CLIC4Q9Y696 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CLIC4Q9Y696 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.72■■□□□ 1.71
CLIC4Q9Y696 PRTG-204ENST00000561292 833 ntTSL 3 BASIC25.72■■□□□ 1.71
CLIC4Q9Y696 AC233723.2-201ENST00000623798 2106 ntBASIC25.72■■□□□ 1.71
CLIC4Q9Y696 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CLIC4Q9Y696 AC021242.3-201ENST00000607598 1377 ntBASIC25.71■■□□□ 1.71
CLIC4Q9Y696 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CLIC4Q9Y696 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
CLIC4Q9Y696 TERT-206ENST00000508104 2486 ntTSL 5 BASIC25.71■■□□□ 1.71
CLIC4Q9Y696 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CLIC4Q9Y696 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC25.71■■□□□ 1.71
CLIC4Q9Y696 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.71■■□□□ 1.71
CLIC4Q9Y696 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CLIC4Q9Y696 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CLIC4Q9Y696 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.71
CLIC4Q9Y696 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC25.7■■□□□ 1.71
CLIC4Q9Y696 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC25.7■■□□□ 1.71
CLIC4Q9Y696 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC25.7■■□□□ 1.7
CLIC4Q9Y696 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC25.7■■□□□ 1.7
CLIC4Q9Y696 COMT-203ENST00000403184 2217 ntTSL 2 BASIC25.7■■□□□ 1.7
CLIC4Q9Y696 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CLIC4Q9Y696 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC25.7■■□□□ 1.7
CLIC4Q9Y696 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC25.7■■□□□ 1.7
CLIC4Q9Y696 CLTA-210ENST00000540080 989 ntTSL 2 BASIC25.7■■□□□ 1.7
CLIC4Q9Y696 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC25.7■■□□□ 1.7
CLIC4Q9Y696 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CLIC4Q9Y696 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
CLIC4Q9Y696 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CLIC4Q9Y696 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CLIC4Q9Y696 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CLIC4Q9Y696 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC25.69■■□□□ 1.7
CLIC4Q9Y696 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CLIC4Q9Y696 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC25.68■■□□□ 1.7
CLIC4Q9Y696 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CLIC4Q9Y696 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC25.68■■□□□ 1.7
CLIC4Q9Y696 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CLIC4Q9Y696 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CLIC4Q9Y696 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC25.68■■□□□ 1.7
CLIC4Q9Y696 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC25.68■■□□□ 1.7
CLIC4Q9Y696 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC25.68■■□□□ 1.7
CLIC4Q9Y696 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CLIC4Q9Y696 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.68■■□□□ 1.7
CLIC4Q9Y696 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC25.68■■□□□ 1.7
CLIC4Q9Y696 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
CLIC4Q9Y696 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CLIC4Q9Y696 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
CLIC4Q9Y696 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC25.67■■□□□ 1.7
CLIC4Q9Y696 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CLIC4Q9Y696 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CLIC4Q9Y696 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
CLIC4Q9Y696 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
CLIC4Q9Y696 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CLIC4Q9Y696 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CLIC4Q9Y696 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CLIC4Q9Y696 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.66■■□□□ 1.7
CLIC4Q9Y696 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CLIC4Q9Y696 AL353803.4-201ENST00000565882 1934 ntBASIC25.66■■□□□ 1.7
CLIC4Q9Y696 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CLIC4Q9Y696 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CLIC4Q9Y696 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CLIC4Q9Y696 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CLIC4Q9Y696 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CLIC4Q9Y696 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CLIC4Q9Y696 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
CLIC4Q9Y696 RARRES2P1-201ENST00000474487 481 ntBASIC25.65■■□□□ 1.7
CLIC4Q9Y696 AC079834.2-201ENST00000609776 1949 ntBASIC25.65■■□□□ 1.7
CLIC4Q9Y696 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
CLIC4Q9Y696 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CLIC4Q9Y696 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CLIC4Q9Y696 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
CLIC4Q9Y696 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CLIC4Q9Y696 AL117328.2-201ENST00000624617 1940 ntBASIC25.64■■□□□ 1.69
CLIC4Q9Y696 GCA-201ENST00000233612 1694 ntTSL 2 BASIC25.64■■□□□ 1.69
CLIC4Q9Y696 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
CLIC4Q9Y696 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CLIC4Q9Y696 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC25.63■■□□□ 1.69
CLIC4Q9Y696 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CLIC4Q9Y696 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC25.63■■□□□ 1.69
CLIC4Q9Y696 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CLIC4Q9Y696 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CLIC4Q9Y696 BX664725.1-201ENST00000438252 379 ntBASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms