Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC34.6■■■■□ 3.13
CDC42BPBQ9Y5S2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
CDC42BPBQ9Y5S2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
CDC42BPBQ9Y5S2 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC34.59■■■■□ 3.13
CDC42BPBQ9Y5S2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC34.59■■■■□ 3.13
CDC42BPBQ9Y5S2 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
CDC42BPBQ9Y5S2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC34.58■■■■□ 3.13
CDC42BPBQ9Y5S2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC34.58■■■■□ 3.13
CDC42BPBQ9Y5S2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC34.58■■■■□ 3.13
CDC42BPBQ9Y5S2 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
CDC42BPBQ9Y5S2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
CDC42BPBQ9Y5S2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC34.58■■■■□ 3.13
CDC42BPBQ9Y5S2 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC34.58■■■■□ 3.13
CDC42BPBQ9Y5S2 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
CDC42BPBQ9Y5S2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC34.58■■■■□ 3.13
CDC42BPBQ9Y5S2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC34.58■■■■□ 3.13
CDC42BPBQ9Y5S2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC34.58■■■■□ 3.13
CDC42BPBQ9Y5S2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC34.58■■■■□ 3.13
CDC42BPBQ9Y5S2 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC34.57■■■■□ 3.13
CDC42BPBQ9Y5S2 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC34.57■■■■□ 3.12
CDC42BPBQ9Y5S2 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
CDC42BPBQ9Y5S2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC34.57■■■■□ 3.12
CDC42BPBQ9Y5S2 AC004911.1-201ENST00000416316 871 ntBASIC34.57■■■■□ 3.12
CDC42BPBQ9Y5S2 DLX3-202ENST00000512495 834 ntTSL 2 BASIC34.57■■■■□ 3.12
CDC42BPBQ9Y5S2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC34.57■■■■□ 3.12
CDC42BPBQ9Y5S2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
CDC42BPBQ9Y5S2 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC34.57■■■■□ 3.12
CDC42BPBQ9Y5S2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC34.56■■■■□ 3.12
CDC42BPBQ9Y5S2 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC34.56■■■■□ 3.12
CDC42BPBQ9Y5S2 OR2I1P-207ENST00000453522 948 ntBASIC34.56■■■■□ 3.12
CDC42BPBQ9Y5S2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC34.56■■■■□ 3.12
CDC42BPBQ9Y5S2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC34.56■■■■□ 3.12
CDC42BPBQ9Y5S2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC34.56■■■■□ 3.12
CDC42BPBQ9Y5S2 AC091060.1-201ENST00000623524 1766 ntBASIC34.56■■■■□ 3.12
CDC42BPBQ9Y5S2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
CDC42BPBQ9Y5S2 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC34.55■■■■□ 3.12
CDC42BPBQ9Y5S2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC34.55■■■■□ 3.12
CDC42BPBQ9Y5S2 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
CDC42BPBQ9Y5S2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC34.55■■■■□ 3.12
CDC42BPBQ9Y5S2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
CDC42BPBQ9Y5S2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
CDC42BPBQ9Y5S2 AC133637.1-201ENST00000624115 1537 ntBASIC34.55■■■■□ 3.12
CDC42BPBQ9Y5S2 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
CDC42BPBQ9Y5S2 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC34.55■■■■□ 3.12
CDC42BPBQ9Y5S2 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC34.55■■■■□ 3.12
CDC42BPBQ9Y5S2 KRT18P61-201ENST00000585825 1298 ntBASIC34.55■■■■□ 3.12
CDC42BPBQ9Y5S2 AL499627.2-201ENST00000606283 725 ntBASIC34.55■■■■□ 3.12
CDC42BPBQ9Y5S2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC34.55■■■■□ 3.12
CDC42BPBQ9Y5S2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC34.55■■■■□ 3.12
CDC42BPBQ9Y5S2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
CDC42BPBQ9Y5S2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC34.54■■■■□ 3.12
CDC42BPBQ9Y5S2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC34.54■■■■□ 3.12
CDC42BPBQ9Y5S2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC34.53■■■■□ 3.12
CDC42BPBQ9Y5S2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC34.53■■■■□ 3.12
CDC42BPBQ9Y5S2 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
CDC42BPBQ9Y5S2 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
CDC42BPBQ9Y5S2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC34.53■■■■□ 3.12
CDC42BPBQ9Y5S2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
CDC42BPBQ9Y5S2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC34.52■■■■□ 3.12
CDC42BPBQ9Y5S2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC34.52■■■■□ 3.12
CDC42BPBQ9Y5S2 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
CDC42BPBQ9Y5S2 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC34.52■■■■□ 3.12
CDC42BPBQ9Y5S2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC34.52■■■■□ 3.12
CDC42BPBQ9Y5S2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC34.52■■■■□ 3.12
CDC42BPBQ9Y5S2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC34.52■■■■□ 3.12
CDC42BPBQ9Y5S2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC34.52■■■■□ 3.12
CDC42BPBQ9Y5S2 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
CDC42BPBQ9Y5S2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC34.51■■■■□ 3.12
CDC42BPBQ9Y5S2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC34.51■■■■□ 3.12
CDC42BPBQ9Y5S2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
CDC42BPBQ9Y5S2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC34.51■■■■□ 3.11
CDC42BPBQ9Y5S2 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC34.51■■■■□ 3.11
CDC42BPBQ9Y5S2 ID1-201ENST00000376105 1233 ntBASIC34.5■■■■□ 3.11
CDC42BPBQ9Y5S2 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC34.5■■■■□ 3.11
CDC42BPBQ9Y5S2 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
CDC42BPBQ9Y5S2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC34.5■■■■□ 3.11
CDC42BPBQ9Y5S2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC34.49■■■■□ 3.11
CDC42BPBQ9Y5S2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC34.49■■■■□ 3.11
CDC42BPBQ9Y5S2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC34.49■■■■□ 3.11
CDC42BPBQ9Y5S2 AC145676.1-201ENST00000514988 2004 ntBASIC34.49■■■■□ 3.11
CDC42BPBQ9Y5S2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC34.49■■■■□ 3.11
CDC42BPBQ9Y5S2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
CDC42BPBQ9Y5S2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC34.49■■■■□ 3.11
CDC42BPBQ9Y5S2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC34.49■■■■□ 3.11
CDC42BPBQ9Y5S2 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC34.49■■■■□ 3.11
CDC42BPBQ9Y5S2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
CDC42BPBQ9Y5S2 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
CDC42BPBQ9Y5S2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC34.48■■■■□ 3.11
CDC42BPBQ9Y5S2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC34.48■■■■□ 3.11
CDC42BPBQ9Y5S2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC34.48■■■■□ 3.11
CDC42BPBQ9Y5S2 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
CDC42BPBQ9Y5S2 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC34.48■■■■□ 3.11
CDC42BPBQ9Y5S2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
CDC42BPBQ9Y5S2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
CDC42BPBQ9Y5S2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
CDC42BPBQ9Y5S2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
CDC42BPBQ9Y5S2 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC34.47■■■■□ 3.11
CDC42BPBQ9Y5S2 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC34.47■■■■□ 3.11
CDC42BPBQ9Y5S2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
CDC42BPBQ9Y5S2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC34.47■■■■□ 3.11
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms