Protein–RNA interactions for Protein: Q9Y4X3

CCL27, C-C motif chemokine 27, humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL27Q9Y4X3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCL27Q9Y4X3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCL27Q9Y4X3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.59■■□□□ 1.05
CCL27Q9Y4X3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCL27Q9Y4X3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
CCL27Q9Y4X3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CCL27Q9Y4X3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.58■■□□□ 1.05
CCL27Q9Y4X3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCL27Q9Y4X3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.58■■□□□ 1.05
CCL27Q9Y4X3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.58■■□□□ 1.05
CCL27Q9Y4X3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCL27Q9Y4X3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.58■■□□□ 1.05
CCL27Q9Y4X3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.58■■□□□ 1.05
CCL27Q9Y4X3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
CCL27Q9Y4X3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCL27Q9Y4X3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.57■■□□□ 1.04
CCL27Q9Y4X3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CCL27Q9Y4X3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.57■■□□□ 1.04
CCL27Q9Y4X3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCL27Q9Y4X3 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CCL27Q9Y4X3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.57■■□□□ 1.04
CCL27Q9Y4X3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.57■■□□□ 1.04
CCL27Q9Y4X3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.57■■□□□ 1.04
CCL27Q9Y4X3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CCL27Q9Y4X3 EP400NL-214ENST00000641289 2402 ntBASIC21.57■■□□□ 1.04
CCL27Q9Y4X3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCL27Q9Y4X3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCL27Q9Y4X3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCL27Q9Y4X3 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CCL27Q9Y4X3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCL27Q9Y4X3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCL27Q9Y4X3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CCL27Q9Y4X3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCL27Q9Y4X3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCL27Q9Y4X3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCL27Q9Y4X3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCL27Q9Y4X3 AL353803.4-201ENST00000565882 1934 ntBASIC21.55■■□□□ 1.04
CCL27Q9Y4X3 YBX1P4-201ENST00000392794 808 ntBASIC21.55■■□□□ 1.04
CCL27Q9Y4X3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.55■■□□□ 1.04
CCL27Q9Y4X3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCL27Q9Y4X3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCL27Q9Y4X3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCL27Q9Y4X3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCL27Q9Y4X3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCL27Q9Y4X3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCL27Q9Y4X3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCL27Q9Y4X3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
CCL27Q9Y4X3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.54■■□□□ 1.04
CCL27Q9Y4X3 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.54■■□□□ 1.04
CCL27Q9Y4X3 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.54■■□□□ 1.04
CCL27Q9Y4X3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCL27Q9Y4X3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.54■■□□□ 1.04
CCL27Q9Y4X3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CCL27Q9Y4X3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCL27Q9Y4X3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.54■■□□□ 1.04
CCL27Q9Y4X3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCL27Q9Y4X3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
CCL27Q9Y4X3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
CCL27Q9Y4X3 GUSBP5-202ENST00000510805 1989 ntBASIC21.54■■□□□ 1.04
CCL27Q9Y4X3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CCL27Q9Y4X3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.53■■□□□ 1.04
CCL27Q9Y4X3 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CCL27Q9Y4X3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.53■■□□□ 1.04
CCL27Q9Y4X3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCL27Q9Y4X3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCL27Q9Y4X3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCL27Q9Y4X3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CCL27Q9Y4X3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCL27Q9Y4X3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCL27Q9Y4X3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCL27Q9Y4X3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.53■■□□□ 1.04
CCL27Q9Y4X3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.52■■□□□ 1.04
CCL27Q9Y4X3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.52■■□□□ 1.04
CCL27Q9Y4X3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CCL27Q9Y4X3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCL27Q9Y4X3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.52■■□□□ 1.04
CCL27Q9Y4X3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.52■■□□□ 1.04
CCL27Q9Y4X3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCL27Q9Y4X3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
CCL27Q9Y4X3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCL27Q9Y4X3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CCL27Q9Y4X3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCL27Q9Y4X3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.52■■□□□ 1.03
CCL27Q9Y4X3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCL27Q9Y4X3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCL27Q9Y4X3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCL27Q9Y4X3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.51■■□□□ 1.03
CCL27Q9Y4X3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCL27Q9Y4X3 AL031848.2-201ENST00000607670 837 ntBASIC21.51■■□□□ 1.03
CCL27Q9Y4X3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.51■■□□□ 1.03
CCL27Q9Y4X3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.51■■□□□ 1.03
CCL27Q9Y4X3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCL27Q9Y4X3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCL27Q9Y4X3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCL27Q9Y4X3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCL27Q9Y4X3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCL27Q9Y4X3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.5■■□□□ 1.03
CCL27Q9Y4X3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.5■■□□□ 1.03
CCL27Q9Y4X3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.5■■□□□ 1.03
CCL27Q9Y4X3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 314.5 ms