Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
RTCBQ9Y3I0 AC133637.1-201ENST00000624115 1537 ntBASIC28.76■■■□□ 2.19
RTCBQ9Y3I0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
RTCBQ9Y3I0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
RTCBQ9Y3I0 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
RTCBQ9Y3I0 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
RTCBQ9Y3I0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
RTCBQ9Y3I0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC28.75■■■□□ 2.19
RTCBQ9Y3I0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC28.75■■■□□ 2.19
RTCBQ9Y3I0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC28.75■■■□□ 2.19
RTCBQ9Y3I0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC28.75■■■□□ 2.19
RTCBQ9Y3I0 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
RTCBQ9Y3I0 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
RTCBQ9Y3I0 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
RTCBQ9Y3I0 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC28.74■■■□□ 2.19
RTCBQ9Y3I0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
RTCBQ9Y3I0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC28.74■■■□□ 2.19
RTCBQ9Y3I0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
RTCBQ9Y3I0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC28.74■■■□□ 2.19
RTCBQ9Y3I0 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC28.74■■■□□ 2.19
RTCBQ9Y3I0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
RTCBQ9Y3I0 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
RTCBQ9Y3I0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
RTCBQ9Y3I0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC28.74■■■□□ 2.19
RTCBQ9Y3I0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
RTCBQ9Y3I0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
RTCBQ9Y3I0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC28.73■■■□□ 2.19
RTCBQ9Y3I0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC28.73■■■□□ 2.19
RTCBQ9Y3I0 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC28.72■■■□□ 2.19
RTCBQ9Y3I0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
RTCBQ9Y3I0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC28.72■■■□□ 2.19
RTCBQ9Y3I0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
RTCBQ9Y3I0 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
RTCBQ9Y3I0 HLA-L-211ENST00000482052 1765 ntBASIC28.72■■■□□ 2.19
RTCBQ9Y3I0 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
RTCBQ9Y3I0 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC28.71■■■□□ 2.19
RTCBQ9Y3I0 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
RTCBQ9Y3I0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC28.71■■■□□ 2.19
RTCBQ9Y3I0 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC28.71■■■□□ 2.19
RTCBQ9Y3I0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC28.71■■■□□ 2.19
RTCBQ9Y3I0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC28.71■■■□□ 2.19
RTCBQ9Y3I0 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC28.71■■■□□ 2.19
RTCBQ9Y3I0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC28.71■■■□□ 2.19
RTCBQ9Y3I0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC28.71■■■□□ 2.19
RTCBQ9Y3I0 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC28.7■■■□□ 2.19
RTCBQ9Y3I0 DUSP8P4-201ENST00000399538 1761 ntBASIC28.7■■■□□ 2.19
RTCBQ9Y3I0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC28.7■■■□□ 2.18
RTCBQ9Y3I0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC28.7■■■□□ 2.18
RTCBQ9Y3I0 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC28.7■■■□□ 2.18
RTCBQ9Y3I0 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC28.7■■■□□ 2.18
RTCBQ9Y3I0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC28.7■■■□□ 2.18
RTCBQ9Y3I0 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
RTCBQ9Y3I0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
RTCBQ9Y3I0 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC28.7■■■□□ 2.18
RTCBQ9Y3I0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.18
RTCBQ9Y3I0 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
RTCBQ9Y3I0 HLA-L-209ENST00000420110 1011 ntBASIC28.69■■■□□ 2.18
RTCBQ9Y3I0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
RTCBQ9Y3I0 AC010525.1-201ENST00000585559 441 ntBASIC28.69■■■□□ 2.18
RTCBQ9Y3I0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
RTCBQ9Y3I0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC28.69■■■□□ 2.18
RTCBQ9Y3I0 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
RTCBQ9Y3I0 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
RTCBQ9Y3I0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC28.69■■■□□ 2.18
RTCBQ9Y3I0 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
RTCBQ9Y3I0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
RTCBQ9Y3I0 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
RTCBQ9Y3I0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC28.68■■■□□ 2.18
RTCBQ9Y3I0 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
RTCBQ9Y3I0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
RTCBQ9Y3I0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC28.68■■■□□ 2.18
RTCBQ9Y3I0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC28.68■■■□□ 2.18
RTCBQ9Y3I0 AL499627.2-201ENST00000606283 725 ntBASIC28.68■■■□□ 2.18
RTCBQ9Y3I0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
RTCBQ9Y3I0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
RTCBQ9Y3I0 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC28.67■■■□□ 2.18
RTCBQ9Y3I0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
RTCBQ9Y3I0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
RTCBQ9Y3I0 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC28.67■■■□□ 2.18
RTCBQ9Y3I0 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC28.67■■■□□ 2.18
RTCBQ9Y3I0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
RTCBQ9Y3I0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC28.67■■■□□ 2.18
RTCBQ9Y3I0 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
RTCBQ9Y3I0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC28.67■■■□□ 2.18
RTCBQ9Y3I0 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
RTCBQ9Y3I0 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC28.67■■■□□ 2.18
RTCBQ9Y3I0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC28.67■■■□□ 2.18
RTCBQ9Y3I0 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC28.66■■■□□ 2.18
RTCBQ9Y3I0 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
RTCBQ9Y3I0 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
RTCBQ9Y3I0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC28.66■■■□□ 2.18
RTCBQ9Y3I0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC28.66■■■□□ 2.18
RTCBQ9Y3I0 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
RTCBQ9Y3I0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
RTCBQ9Y3I0 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
RTCBQ9Y3I0 AL121749.1-202ENST00000609313 2153 ntBASIC28.65■■■□□ 2.18
RTCBQ9Y3I0 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
RTCBQ9Y3I0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
RTCBQ9Y3I0 NT5C3AP1-201ENST00000394500 1012 ntBASIC28.65■■■□□ 2.18
RTCBQ9Y3I0 OR2I1P-207ENST00000453522 948 ntBASIC28.65■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms