Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 IGHV3-19-201ENST00000521488 291 ntBASIC29.62■■■□□ 2.33
SPG7Q9UQ90 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC29.62■■■□□ 2.33
SPG7Q9UQ90 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
SPG7Q9UQ90 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC29.61■■■□□ 2.33
SPG7Q9UQ90 AC133637.1-201ENST00000624115 1537 ntBASIC29.61■■■□□ 2.33
SPG7Q9UQ90 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
SPG7Q9UQ90 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
SPG7Q9UQ90 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC29.6■■■□□ 2.33
SPG7Q9UQ90 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC29.6■■■□□ 2.33
SPG7Q9UQ90 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
SPG7Q9UQ90 AL358852.1-201ENST00000623174 1268 ntBASIC29.6■■■□□ 2.33
SPG7Q9UQ90 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
SPG7Q9UQ90 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
SPG7Q9UQ90 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC29.59■■■□□ 2.33
SPG7Q9UQ90 HACD1-201ENST00000326961 773 ntTSL 2 BASIC29.59■■■□□ 2.33
SPG7Q9UQ90 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC29.59■■■□□ 2.33
SPG7Q9UQ90 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
SPG7Q9UQ90 AL499627.2-201ENST00000606283 725 ntBASIC29.59■■■□□ 2.33
SPG7Q9UQ90 AL031602.1-201ENST00000633169 911 ntBASIC29.59■■■□□ 2.33
SPG7Q9UQ90 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC29.59■■■□□ 2.33
SPG7Q9UQ90 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC29.59■■■□□ 2.33
SPG7Q9UQ90 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC29.59■■■□□ 2.33
SPG7Q9UQ90 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC29.59■■■□□ 2.33
SPG7Q9UQ90 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC29.59■■■□□ 2.33
SPG7Q9UQ90 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
SPG7Q9UQ90 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
SPG7Q9UQ90 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
SPG7Q9UQ90 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
SPG7Q9UQ90 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC29.58■■■□□ 2.33
SPG7Q9UQ90 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
SPG7Q9UQ90 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC29.58■■■□□ 2.33
SPG7Q9UQ90 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC29.58■■■□□ 2.33
SPG7Q9UQ90 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC29.58■■■□□ 2.33
SPG7Q9UQ90 AC135731.1-201ENST00000569415 2548 ntBASIC29.58■■■□□ 2.33
SPG7Q9UQ90 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC29.58■■■□□ 2.33
SPG7Q9UQ90 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
SPG7Q9UQ90 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
SPG7Q9UQ90 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC29.57■■■□□ 2.32
SPG7Q9UQ90 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
SPG7Q9UQ90 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
SPG7Q9UQ90 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC29.57■■■□□ 2.32
SPG7Q9UQ90 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
SPG7Q9UQ90 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
SPG7Q9UQ90 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC29.57■■■□□ 2.32
SPG7Q9UQ90 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC29.57■■■□□ 2.32
SPG7Q9UQ90 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
SPG7Q9UQ90 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC29.57■■■□□ 2.32
SPG7Q9UQ90 MIR572-201ENST00000384983 95 ntBASIC29.57■■■□□ 2.32
SPG7Q9UQ90 AC027612.3-201ENST00000413684 1047 ntBASIC29.57■■■□□ 2.32
SPG7Q9UQ90 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC29.57■■■□□ 2.32
SPG7Q9UQ90 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC29.57■■■□□ 2.32
SPG7Q9UQ90 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
SPG7Q9UQ90 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
SPG7Q9UQ90 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC29.56■■■□□ 2.32
SPG7Q9UQ90 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC29.56■■■□□ 2.32
SPG7Q9UQ90 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
SPG7Q9UQ90 RAB43-208ENST00000615093 783 ntTSL 5 BASIC29.56■■■□□ 2.32
SPG7Q9UQ90 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC29.56■■■□□ 2.32
SPG7Q9UQ90 TMEM202-AS1-202ENST00000565181 2325 ntBASIC29.56■■■□□ 2.32
SPG7Q9UQ90 SHF-207ENST00000560540 2062 ntTSL 5 BASIC29.56■■■□□ 2.32
SPG7Q9UQ90 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
SPG7Q9UQ90 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC29.55■■■□□ 2.32
SPG7Q9UQ90 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC29.55■■■□□ 2.32
SPG7Q9UQ90 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC29.55■■■□□ 2.32
SPG7Q9UQ90 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC29.55■■■□□ 2.32
SPG7Q9UQ90 KRT18P5-201ENST00000436075 1291 ntBASIC29.55■■■□□ 2.32
SPG7Q9UQ90 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
SPG7Q9UQ90 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
SPG7Q9UQ90 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
SPG7Q9UQ90 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC29.55■■■□□ 2.32
SPG7Q9UQ90 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC29.55■■■□□ 2.32
SPG7Q9UQ90 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
SPG7Q9UQ90 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
SPG7Q9UQ90 FP325331.1-202ENST00000623531 1380 ntBASIC29.54■■■□□ 2.32
SPG7Q9UQ90 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC29.54■■■□□ 2.32
SPG7Q9UQ90 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC29.54■■■□□ 2.32
SPG7Q9UQ90 AC123595.1-201ENST00000440769 1046 ntBASIC29.54■■■□□ 2.32
SPG7Q9UQ90 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC29.54■■■□□ 2.32
SPG7Q9UQ90 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
SPG7Q9UQ90 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC29.54■■■□□ 2.32
SPG7Q9UQ90 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC29.53■■■□□ 2.32
SPG7Q9UQ90 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC29.53■■■□□ 2.32
SPG7Q9UQ90 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC29.53■■■□□ 2.32
SPG7Q9UQ90 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
SPG7Q9UQ90 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
SPG7Q9UQ90 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
SPG7Q9UQ90 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC29.53■■■□□ 2.32
SPG7Q9UQ90 DUX4L2-201ENST00000561772 1275 ntBASIC29.53■■■□□ 2.32
SPG7Q9UQ90 AC022517.1-201ENST00000592429 346 ntBASIC29.53■■■□□ 2.32
SPG7Q9UQ90 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC29.53■■■□□ 2.32
SPG7Q9UQ90 DUX4L6-201ENST00000626483 1275 ntBASIC29.53■■■□□ 2.32
SPG7Q9UQ90 DUX4L1-201ENST00000627662 1275 ntBASIC29.53■■■□□ 2.32
SPG7Q9UQ90 DUX4L8-201ENST00000629013 1275 ntBASIC29.53■■■□□ 2.32
SPG7Q9UQ90 DUX4L3-201ENST00000630187 1275 ntBASIC29.53■■■□□ 2.32
SPG7Q9UQ90 DUX4L7-201ENST00000630678 1275 ntBASIC29.53■■■□□ 2.32
SPG7Q9UQ90 DUX4L5-201ENST00000630834 1275 ntBASIC29.53■■■□□ 2.32
SPG7Q9UQ90 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC29.53■■■□□ 2.32
SPG7Q9UQ90 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC29.53■■■□□ 2.32
SPG7Q9UQ90 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC29.53■■■□□ 2.32
SPG7Q9UQ90 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms