Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC27.56■■■□□ 2
ZC3H4Q9UPT8 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC27.56■■■□□ 2
ZC3H4Q9UPT8 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC27.56■■■□□ 2
ZC3H4Q9UPT8 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC27.56■■■□□ 2
ZC3H4Q9UPT8 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC27.56■■■□□ 2
ZC3H4Q9UPT8 AL499627.2-201ENST00000606283 725 ntBASIC27.56■■■□□ 2
ZC3H4Q9UPT8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
ZC3H4Q9UPT8 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
ZC3H4Q9UPT8 AC141586.4-201ENST00000624558 1573 ntBASIC27.55■■■□□ 2
ZC3H4Q9UPT8 AC096887.2-201ENST00000623443 1957 ntBASIC27.55■■■□□ 2
ZC3H4Q9UPT8 METTL26-203ENST00000397664 604 ntTSL 2 BASIC27.55■■■□□ 2
ZC3H4Q9UPT8 GALNS-213ENST00000569433 723 ntTSL 3 BASIC27.55■■■□□ 2
ZC3H4Q9UPT8 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC27.55■■■□□ 2
ZC3H4Q9UPT8 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC27.55■■■□□ 2
ZC3H4Q9UPT8 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
ZC3H4Q9UPT8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC27.54■■■□□ 2
ZC3H4Q9UPT8 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
ZC3H4Q9UPT8 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC27.54■■■□□ 2
ZC3H4Q9UPT8 STX7-201ENST00000367937 1090 ntTSL 5 BASIC27.54■■■□□ 2
ZC3H4Q9UPT8 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC27.54■■■□□ 2
ZC3H4Q9UPT8 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC27.54■■■□□ 2
ZC3H4Q9UPT8 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC27.54■■■□□ 2
ZC3H4Q9UPT8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC27.54■■■□□ 2
ZC3H4Q9UPT8 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
ZC3H4Q9UPT8 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
ZC3H4Q9UPT8 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC27.54■■■□□ 2
ZC3H4Q9UPT8 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
ZC3H4Q9UPT8 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC27.53■■■□□ 2
ZC3H4Q9UPT8 DBI-210ENST00000542275 757 ntTSL 5 BASIC27.53■■■□□ 2
ZC3H4Q9UPT8 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC27.53■■■□□ 2
ZC3H4Q9UPT8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC27.52■■■□□ 2
ZC3H4Q9UPT8 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
ZC3H4Q9UPT8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC27.52■■■□□ 2
ZC3H4Q9UPT8 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
ZC3H4Q9UPT8 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
ZC3H4Q9UPT8 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC27.52■■■□□ 2
ZC3H4Q9UPT8 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
ZC3H4Q9UPT8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
ZC3H4Q9UPT8 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC27.51■■□□□ 1.99
ZC3H4Q9UPT8 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC27.51■■□□□ 1.99
ZC3H4Q9UPT8 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC27.51■■□□□ 1.99
ZC3H4Q9UPT8 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC27.51■■□□□ 1.99
ZC3H4Q9UPT8 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC27.51■■□□□ 1.99
ZC3H4Q9UPT8 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC27.51■■□□□ 1.99
ZC3H4Q9UPT8 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC27.51■■□□□ 1.99
ZC3H4Q9UPT8 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
ZC3H4Q9UPT8 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC27.51■■□□□ 1.99
ZC3H4Q9UPT8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
ZC3H4Q9UPT8 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
ZC3H4Q9UPT8 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
ZC3H4Q9UPT8 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
ZC3H4Q9UPT8 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC27.5■■□□□ 1.99
ZC3H4Q9UPT8 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
ZC3H4Q9UPT8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
ZC3H4Q9UPT8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
ZC3H4Q9UPT8 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
ZC3H4Q9UPT8 AC135731.1-201ENST00000569415 2548 ntBASIC27.5■■□□□ 1.99
ZC3H4Q9UPT8 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
ZC3H4Q9UPT8 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
ZC3H4Q9UPT8 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC27.49■■□□□ 1.99
ZC3H4Q9UPT8 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC27.49■■□□□ 1.99
ZC3H4Q9UPT8 WWOX-218ENST00000627394 894 ntTSL 5 BASIC27.49■■□□□ 1.99
ZC3H4Q9UPT8 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC27.49■■□□□ 1.99
ZC3H4Q9UPT8 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
ZC3H4Q9UPT8 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
ZC3H4Q9UPT8 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
ZC3H4Q9UPT8 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC27.48■■□□□ 1.99
ZC3H4Q9UPT8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
ZC3H4Q9UPT8 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC27.48■■□□□ 1.99
ZC3H4Q9UPT8 AP005435.1-201ENST00000529293 1178 ntBASIC27.48■■□□□ 1.99
ZC3H4Q9UPT8 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
ZC3H4Q9UPT8 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC27.48■■□□□ 1.99
ZC3H4Q9UPT8 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
ZC3H4Q9UPT8 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC27.48■■□□□ 1.99
ZC3H4Q9UPT8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
ZC3H4Q9UPT8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC27.47■■□□□ 1.99
ZC3H4Q9UPT8 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
ZC3H4Q9UPT8 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
ZC3H4Q9UPT8 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC27.47■■□□□ 1.99
ZC3H4Q9UPT8 AC142086.2-201ENST00000569753 217 ntBASIC27.47■■□□□ 1.99
ZC3H4Q9UPT8 AL121749.1-202ENST00000609313 2153 ntBASIC27.47■■□□□ 1.99
ZC3H4Q9UPT8 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC27.47■■□□□ 1.99
ZC3H4Q9UPT8 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC27.46■■□□□ 1.99
ZC3H4Q9UPT8 OR2I1P-207ENST00000453522 948 ntBASIC27.46■■□□□ 1.99
ZC3H4Q9UPT8 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
ZC3H4Q9UPT8 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
ZC3H4Q9UPT8 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
ZC3H4Q9UPT8 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC27.46■■□□□ 1.99
ZC3H4Q9UPT8 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC27.45■■□□□ 1.99
ZC3H4Q9UPT8 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
ZC3H4Q9UPT8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC27.45■■□□□ 1.99
ZC3H4Q9UPT8 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
ZC3H4Q9UPT8 TSPY20P-201ENST00000450910 630 ntBASIC27.45■■□□□ 1.99
ZC3H4Q9UPT8 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC27.45■■□□□ 1.99
ZC3H4Q9UPT8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
ZC3H4Q9UPT8 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC27.45■■□□□ 1.99
ZC3H4Q9UPT8 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC27.45■■□□□ 1.98
ZC3H4Q9UPT8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC27.45■■□□□ 1.98
ZC3H4Q9UPT8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
ZC3H4Q9UPT8 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms