Protein–RNA interactions for Protein: Q9P1U1

ACTR3B, Actin-related protein 3B, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3BQ9P1U1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ACTR3BQ9P1U1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.2■□□□□ 0.98
ACTR3BQ9P1U1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ACTR3BQ9P1U1 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ACTR3BQ9P1U1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
ACTR3BQ9P1U1 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ACTR3BQ9P1U1 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ACTR3BQ9P1U1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.19■□□□□ 0.98
ACTR3BQ9P1U1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
ACTR3BQ9P1U1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
ACTR3BQ9P1U1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ACTR3BQ9P1U1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.19■□□□□ 0.98
ACTR3BQ9P1U1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
ACTR3BQ9P1U1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
ACTR3BQ9P1U1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
ACTR3BQ9P1U1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
ACTR3BQ9P1U1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ACTR3BQ9P1U1 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
ACTR3BQ9P1U1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.18■□□□□ 0.98
ACTR3BQ9P1U1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ACTR3BQ9P1U1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ACTR3BQ9P1U1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
ACTR3BQ9P1U1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ACTR3BQ9P1U1 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.18■□□□□ 0.98
ACTR3BQ9P1U1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
ACTR3BQ9P1U1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ACTR3BQ9P1U1 AC139530.1-201ENST00000575312 1977 ntBASIC21.17■□□□□ 0.98
ACTR3BQ9P1U1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.17■□□□□ 0.98
ACTR3BQ9P1U1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
ACTR3BQ9P1U1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ACTR3BQ9P1U1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.17■□□□□ 0.98
ACTR3BQ9P1U1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ACTR3BQ9P1U1 AC131274.2-201ENST00000580697 1507 ntBASIC21.17■□□□□ 0.98
ACTR3BQ9P1U1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ACTR3BQ9P1U1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.17■□□□□ 0.98
ACTR3BQ9P1U1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ACTR3BQ9P1U1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
ACTR3BQ9P1U1 AC092053.2-201ENST00000640557 1818 ntBASIC21.17■□□□□ 0.98
ACTR3BQ9P1U1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ACTR3BQ9P1U1 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ACTR3BQ9P1U1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.17■□□□□ 0.98
ACTR3BQ9P1U1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ACTR3BQ9P1U1 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ACTR3BQ9P1U1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.16■□□□□ 0.98
ACTR3BQ9P1U1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.16■□□□□ 0.98
ACTR3BQ9P1U1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ACTR3BQ9P1U1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ACTR3BQ9P1U1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ACTR3BQ9P1U1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ACTR3BQ9P1U1 C11orf96-202ENST00000528572 1834 ntBASIC21.16■□□□□ 0.98
ACTR3BQ9P1U1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.16■□□□□ 0.98
ACTR3BQ9P1U1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ACTR3BQ9P1U1 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ACTR3BQ9P1U1 AC009831.1-201ENST00000580420 1582 ntBASIC21.16■□□□□ 0.98
ACTR3BQ9P1U1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ACTR3BQ9P1U1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ACTR3BQ9P1U1 AL137060.1-201ENST00000618151 2648 ntBASIC21.16■□□□□ 0.98
ACTR3BQ9P1U1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ACTR3BQ9P1U1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ACTR3BQ9P1U1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ACTR3BQ9P1U1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
ACTR3BQ9P1U1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ACTR3BQ9P1U1 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.16■□□□□ 0.98
ACTR3BQ9P1U1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ACTR3BQ9P1U1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ACTR3BQ9P1U1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ACTR3BQ9P1U1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ACTR3BQ9P1U1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ACTR3BQ9P1U1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ACTR3BQ9P1U1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.15■□□□□ 0.98
ACTR3BQ9P1U1 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ACTR3BQ9P1U1 AC079630.1-202ENST00000618127 1840 ntBASIC21.15■□□□□ 0.98
ACTR3BQ9P1U1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ACTR3BQ9P1U1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ACTR3BQ9P1U1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
ACTR3BQ9P1U1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ACTR3BQ9P1U1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
ACTR3BQ9P1U1 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ACTR3BQ9P1U1 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
ACTR3BQ9P1U1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.14■□□□□ 0.98
ACTR3BQ9P1U1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.14■□□□□ 0.97
ACTR3BQ9P1U1 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ACTR3BQ9P1U1 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ACTR3BQ9P1U1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ACTR3BQ9P1U1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ACTR3BQ9P1U1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.13■□□□□ 0.97
ACTR3BQ9P1U1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ACTR3BQ9P1U1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
ACTR3BQ9P1U1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ACTR3BQ9P1U1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
ACTR3BQ9P1U1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
ACTR3BQ9P1U1 MIR639-201ENST00000384974 98 ntBASIC21.13■□□□□ 0.97
ACTR3BQ9P1U1 AC133552.2-201ENST00000619106 1032 ntBASIC21.13■□□□□ 0.97
ACTR3BQ9P1U1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.13■□□□□ 0.97
ACTR3BQ9P1U1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ACTR3BQ9P1U1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ACTR3BQ9P1U1 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ACTR3BQ9P1U1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
ACTR3BQ9P1U1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
ACTR3BQ9P1U1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms