Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
SLC52A1Q9NWF4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC32.73■■■□□ 2.83
SLC52A1Q9NWF4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
SLC52A1Q9NWF4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC32.73■■■□□ 2.83
SLC52A1Q9NWF4 TERF1P2-201ENST00000583350 1212 ntBASIC32.73■■■□□ 2.83
SLC52A1Q9NWF4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
SLC52A1Q9NWF4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC32.73■■■□□ 2.83
SLC52A1Q9NWF4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC32.72■■■□□ 2.83
SLC52A1Q9NWF4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC32.72■■■□□ 2.83
SLC52A1Q9NWF4 AC004911.1-201ENST00000416316 871 ntBASIC32.72■■■□□ 2.83
SLC52A1Q9NWF4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC32.72■■■□□ 2.83
SLC52A1Q9NWF4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC32.72■■■□□ 2.83
SLC52A1Q9NWF4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
SLC52A1Q9NWF4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
SLC52A1Q9NWF4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
SLC52A1Q9NWF4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC32.71■■■□□ 2.83
SLC52A1Q9NWF4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
SLC52A1Q9NWF4 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
SLC52A1Q9NWF4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC32.71■■■□□ 2.83
SLC52A1Q9NWF4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC32.71■■■□□ 2.83
SLC52A1Q9NWF4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC32.71■■■□□ 2.83
SLC52A1Q9NWF4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
SLC52A1Q9NWF4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC32.7■■■□□ 2.83
SLC52A1Q9NWF4 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC32.7■■■□□ 2.83
SLC52A1Q9NWF4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC32.7■■■□□ 2.83
SLC52A1Q9NWF4 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC32.7■■■□□ 2.83
SLC52A1Q9NWF4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC32.7■■■□□ 2.83
SLC52A1Q9NWF4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC32.7■■■□□ 2.82
SLC52A1Q9NWF4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
SLC52A1Q9NWF4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC32.69■■■□□ 2.82
SLC52A1Q9NWF4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC32.69■■■□□ 2.82
SLC52A1Q9NWF4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC32.69■■■□□ 2.82
SLC52A1Q9NWF4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
SLC52A1Q9NWF4 AC145676.1-201ENST00000514988 2004 ntBASIC32.69■■■□□ 2.82
SLC52A1Q9NWF4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
SLC52A1Q9NWF4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC32.69■■■□□ 2.82
SLC52A1Q9NWF4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC32.69■■■□□ 2.82
SLC52A1Q9NWF4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC32.69■■■□□ 2.82
SLC52A1Q9NWF4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC32.69■■■□□ 2.82
SLC52A1Q9NWF4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC32.68■■■□□ 2.82
SLC52A1Q9NWF4 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
SLC52A1Q9NWF4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
SLC52A1Q9NWF4 OR2I1P-207ENST00000453522 948 ntBASIC32.68■■■□□ 2.82
SLC52A1Q9NWF4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC32.68■■■□□ 2.82
SLC52A1Q9NWF4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC32.68■■■□□ 2.82
SLC52A1Q9NWF4 NTF6G-201ENST00000591094 616 ntBASIC32.68■■■□□ 2.82
SLC52A1Q9NWF4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC32.68■■■□□ 2.82
SLC52A1Q9NWF4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
SLC52A1Q9NWF4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC32.68■■■□□ 2.82
SLC52A1Q9NWF4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC32.67■■■□□ 2.82
SLC52A1Q9NWF4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC32.67■■■□□ 2.82
SLC52A1Q9NWF4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC32.67■■■□□ 2.82
SLC52A1Q9NWF4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC32.67■■■□□ 2.82
SLC52A1Q9NWF4 ID1-201ENST00000376105 1233 ntBASIC32.67■■■□□ 2.82
SLC52A1Q9NWF4 KRT18P14-201ENST00000534205 1250 ntBASIC32.67■■■□□ 2.82
SLC52A1Q9NWF4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC32.67■■■□□ 2.82
SLC52A1Q9NWF4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC32.67■■■□□ 2.82
SLC52A1Q9NWF4 AC091060.1-201ENST00000623524 1766 ntBASIC32.67■■■□□ 2.82
SLC52A1Q9NWF4 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC32.67■■■□□ 2.82
SLC52A1Q9NWF4 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
SLC52A1Q9NWF4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
SLC52A1Q9NWF4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
SLC52A1Q9NWF4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC32.66■■■□□ 2.82
SLC52A1Q9NWF4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
SLC52A1Q9NWF4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC32.66■■■□□ 2.82
SLC52A1Q9NWF4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC32.66■■■□□ 2.82
SLC52A1Q9NWF4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC32.66■■■□□ 2.82
SLC52A1Q9NWF4 LINC02228-203ENST00000641970 1355 ntBASIC32.66■■■□□ 2.82
SLC52A1Q9NWF4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC32.66■■■□□ 2.82
SLC52A1Q9NWF4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC32.66■■■□□ 2.82
SLC52A1Q9NWF4 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC32.65■■■□□ 2.82
SLC52A1Q9NWF4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC32.65■■■□□ 2.82
SLC52A1Q9NWF4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC32.65■■■□□ 2.82
SLC52A1Q9NWF4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC32.64■■■□□ 2.82
SLC52A1Q9NWF4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
SLC52A1Q9NWF4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC32.64■■■□□ 2.82
SLC52A1Q9NWF4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC32.64■■■□□ 2.82
SLC52A1Q9NWF4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC32.64■■■□□ 2.82
SLC52A1Q9NWF4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
SLC52A1Q9NWF4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC32.64■■■□□ 2.82
SLC52A1Q9NWF4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC32.63■■■□□ 2.81
SLC52A1Q9NWF4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
SLC52A1Q9NWF4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
SLC52A1Q9NWF4 GXYLT1P2-201ENST00000433312 1230 ntBASIC32.63■■■□□ 2.81
SLC52A1Q9NWF4 AC010525.1-201ENST00000585559 441 ntBASIC32.63■■■□□ 2.81
SLC52A1Q9NWF4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC32.63■■■□□ 2.81
SLC52A1Q9NWF4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
SLC52A1Q9NWF4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
SLC52A1Q9NWF4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
SLC52A1Q9NWF4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
SLC52A1Q9NWF4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
SLC52A1Q9NWF4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC32.62■■■□□ 2.81
SLC52A1Q9NWF4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC32.62■■■□□ 2.81
SLC52A1Q9NWF4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC32.62■■■□□ 2.81
SLC52A1Q9NWF4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC32.61■■■□□ 2.81
SLC52A1Q9NWF4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
SLC52A1Q9NWF4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC32.61■■■□□ 2.81
SLC52A1Q9NWF4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC32.61■■■□□ 2.81
SLC52A1Q9NWF4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
SLC52A1Q9NWF4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms