Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC092068.2-201ENST00000590491 1708 ntBASIC24.05■■□□□ 1.44
CISHQ9NSE2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CISHQ9NSE2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC24.05■■□□□ 1.44
CISHQ9NSE2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CISHQ9NSE2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CISHQ9NSE2 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.05■■□□□ 1.44
CISHQ9NSE2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC24.05■■□□□ 1.44
CISHQ9NSE2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CISHQ9NSE2 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CISHQ9NSE2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CISHQ9NSE2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CISHQ9NSE2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CISHQ9NSE2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC24.04■■□□□ 1.44
CISHQ9NSE2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.04■■□□□ 1.44
CISHQ9NSE2 AC131212.1-201ENST00000613771 668 ntBASIC24.04■■□□□ 1.44
CISHQ9NSE2 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CISHQ9NSE2 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC24.03■■□□□ 1.44
CISHQ9NSE2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
CISHQ9NSE2 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CISHQ9NSE2 CASK-201ENST00000378154 2494 ntTSL 5 BASIC24.03■■□□□ 1.44
CISHQ9NSE2 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
CISHQ9NSE2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.03■■□□□ 1.44
CISHQ9NSE2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.03■■□□□ 1.44
CISHQ9NSE2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.03■■□□□ 1.44
CISHQ9NSE2 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
CISHQ9NSE2 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CISHQ9NSE2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
CISHQ9NSE2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
CISHQ9NSE2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
CISHQ9NSE2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC24.02■■□□□ 1.44
CISHQ9NSE2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CISHQ9NSE2 C17orf82-201ENST00000623772 1530 ntBASIC24.02■■□□□ 1.44
CISHQ9NSE2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CISHQ9NSE2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CISHQ9NSE2 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC24.02■■□□□ 1.44
CISHQ9NSE2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.02■■□□□ 1.44
CISHQ9NSE2 AL512631.2-201ENST00000604634 923 ntBASIC24.02■■□□□ 1.44
CISHQ9NSE2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
CISHQ9NSE2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC24.01■■□□□ 1.43
CISHQ9NSE2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CISHQ9NSE2 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.01■■□□□ 1.43
CISHQ9NSE2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.01■■□□□ 1.43
CISHQ9NSE2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC24.01■■□□□ 1.43
CISHQ9NSE2 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC24.01■■□□□ 1.43
CISHQ9NSE2 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC24.01■■□□□ 1.43
CISHQ9NSE2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CISHQ9NSE2 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
CISHQ9NSE2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC24■■□□□ 1.43
CISHQ9NSE2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
CISHQ9NSE2 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CISHQ9NSE2 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CISHQ9NSE2 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
CISHQ9NSE2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC24■■□□□ 1.43
CISHQ9NSE2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CISHQ9NSE2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24■■□□□ 1.43
CISHQ9NSE2 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC24■■□□□ 1.43
CISHQ9NSE2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
CISHQ9NSE2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CISHQ9NSE2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CISHQ9NSE2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.99■■□□□ 1.43
CISHQ9NSE2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
CISHQ9NSE2 AC144652.1-201ENST00000609974 1624 ntBASIC23.99■■□□□ 1.43
CISHQ9NSE2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
CISHQ9NSE2 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CISHQ9NSE2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
CISHQ9NSE2 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CISHQ9NSE2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.99■■□□□ 1.43
CISHQ9NSE2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.99■■□□□ 1.43
CISHQ9NSE2 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.99■■□□□ 1.43
CISHQ9NSE2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.99■■□□□ 1.43
CISHQ9NSE2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
CISHQ9NSE2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CISHQ9NSE2 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CISHQ9NSE2 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CISHQ9NSE2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CISHQ9NSE2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
CISHQ9NSE2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CISHQ9NSE2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CISHQ9NSE2 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
CISHQ9NSE2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.98■■□□□ 1.43
CISHQ9NSE2 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CISHQ9NSE2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CISHQ9NSE2 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CISHQ9NSE2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CISHQ9NSE2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.98■■□□□ 1.43
CISHQ9NSE2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.98■■□□□ 1.43
CISHQ9NSE2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CISHQ9NSE2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
CISHQ9NSE2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
CISHQ9NSE2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CISHQ9NSE2 DUSP8P5-201ENST00000422884 1815 ntBASIC23.97■■□□□ 1.43
CISHQ9NSE2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.97■■□□□ 1.43
CISHQ9NSE2 AC131281.2-201ENST00000520478 145 ntBASIC23.97■■□□□ 1.43
CISHQ9NSE2 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.97■■□□□ 1.43
CISHQ9NSE2 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CISHQ9NSE2 MIR4466-201ENST00000606121 54 ntBASIC23.97■■□□□ 1.43
CISHQ9NSE2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.96■■□□□ 1.43
CISHQ9NSE2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CISHQ9NSE2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CISHQ9NSE2 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.96■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms