Protein–RNA interactions for Protein: Q9H7E2

TDRD3, Tudor domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 651 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3Q9H7E2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
TDRD3Q9H7E2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
TDRD3Q9H7E2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
TDRD3Q9H7E2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC26.93■■□□□ 1.9
TDRD3Q9H7E2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.93■■□□□ 1.9
TDRD3Q9H7E2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC26.92■■□□□ 1.9
TDRD3Q9H7E2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC26.92■■□□□ 1.9
TDRD3Q9H7E2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
TDRD3Q9H7E2 KRT18P5-201ENST00000436075 1291 ntBASIC26.92■■□□□ 1.9
TDRD3Q9H7E2 AC022517.1-201ENST00000592429 346 ntBASIC26.92■■□□□ 1.9
TDRD3Q9H7E2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC26.92■■□□□ 1.9
TDRD3Q9H7E2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
TDRD3Q9H7E2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
TDRD3Q9H7E2 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
TDRD3Q9H7E2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
TDRD3Q9H7E2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC26.91■■□□□ 1.9
TDRD3Q9H7E2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
TDRD3Q9H7E2 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.91■■□□□ 1.9
TDRD3Q9H7E2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC26.91■■□□□ 1.9
TDRD3Q9H7E2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
TDRD3Q9H7E2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC26.9■■□□□ 1.9
TDRD3Q9H7E2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
TDRD3Q9H7E2 AC133637.1-201ENST00000624115 1537 ntBASIC26.9■■□□□ 1.9
TDRD3Q9H7E2 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
TDRD3Q9H7E2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
TDRD3Q9H7E2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
TDRD3Q9H7E2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC26.9■■□□□ 1.9
TDRD3Q9H7E2 IGHV3-19-201ENST00000521488 291 ntBASIC26.9■■□□□ 1.9
TDRD3Q9H7E2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC26.9■■□□□ 1.9
TDRD3Q9H7E2 DUX4L2-201ENST00000561772 1275 ntBASIC26.9■■□□□ 1.9
TDRD3Q9H7E2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC26.9■■□□□ 1.9
TDRD3Q9H7E2 DUX4L6-201ENST00000626483 1275 ntBASIC26.9■■□□□ 1.9
TDRD3Q9H7E2 DUX4L1-201ENST00000627662 1275 ntBASIC26.9■■□□□ 1.9
TDRD3Q9H7E2 DUX4L8-201ENST00000629013 1275 ntBASIC26.9■■□□□ 1.9
TDRD3Q9H7E2 DUX4L3-201ENST00000630187 1275 ntBASIC26.9■■□□□ 1.9
TDRD3Q9H7E2 DUX4L7-201ENST00000630678 1275 ntBASIC26.9■■□□□ 1.9
TDRD3Q9H7E2 DUX4L5-201ENST00000630834 1275 ntBASIC26.9■■□□□ 1.9
TDRD3Q9H7E2 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
TDRD3Q9H7E2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC26.9■■□□□ 1.9
TDRD3Q9H7E2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC26.89■■□□□ 1.9
TDRD3Q9H7E2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC26.89■■□□□ 1.9
TDRD3Q9H7E2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
TDRD3Q9H7E2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
TDRD3Q9H7E2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
TDRD3Q9H7E2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC26.89■■□□□ 1.9
TDRD3Q9H7E2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
TDRD3Q9H7E2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
TDRD3Q9H7E2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC26.89■■□□□ 1.9
TDRD3Q9H7E2 MIR6084-201ENST00000622012 110 ntBASIC26.89■■□□□ 1.9
TDRD3Q9H7E2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
TDRD3Q9H7E2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.89
TDRD3Q9H7E2 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC26.89■■□□□ 1.89
TDRD3Q9H7E2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC26.89■■□□□ 1.89
TDRD3Q9H7E2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
TDRD3Q9H7E2 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
TDRD3Q9H7E2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
TDRD3Q9H7E2 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC26.88■■□□□ 1.89
TDRD3Q9H7E2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
TDRD3Q9H7E2 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC26.88■■□□□ 1.89
TDRD3Q9H7E2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
TDRD3Q9H7E2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
TDRD3Q9H7E2 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
TDRD3Q9H7E2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
TDRD3Q9H7E2 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
TDRD3Q9H7E2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
TDRD3Q9H7E2 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
TDRD3Q9H7E2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
TDRD3Q9H7E2 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.87■■□□□ 1.89
TDRD3Q9H7E2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC26.87■■□□□ 1.89
TDRD3Q9H7E2 AP003733.4-201ENST00000623785 1697 ntBASIC26.87■■□□□ 1.89
TDRD3Q9H7E2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
TDRD3Q9H7E2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC26.87■■□□□ 1.89
TDRD3Q9H7E2 AC010525.1-201ENST00000585559 441 ntBASIC26.87■■□□□ 1.89
TDRD3Q9H7E2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC26.87■■□□□ 1.89
TDRD3Q9H7E2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC26.87■■□□□ 1.89
TDRD3Q9H7E2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
TDRD3Q9H7E2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
TDRD3Q9H7E2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC26.86■■□□□ 1.89
TDRD3Q9H7E2 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC26.86■■□□□ 1.89
TDRD3Q9H7E2 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
TDRD3Q9H7E2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC26.86■■□□□ 1.89
TDRD3Q9H7E2 MIR572-201ENST00000384983 95 ntBASIC26.86■■□□□ 1.89
TDRD3Q9H7E2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
TDRD3Q9H7E2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC26.86■■□□□ 1.89
TDRD3Q9H7E2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
TDRD3Q9H7E2 AL358852.1-201ENST00000623174 1268 ntBASIC26.86■■□□□ 1.89
TDRD3Q9H7E2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
TDRD3Q9H7E2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
TDRD3Q9H7E2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
TDRD3Q9H7E2 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
TDRD3Q9H7E2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC26.85■■□□□ 1.89
TDRD3Q9H7E2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
TDRD3Q9H7E2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC26.85■■□□□ 1.89
TDRD3Q9H7E2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
TDRD3Q9H7E2 AC027612.3-201ENST00000413684 1047 ntBASIC26.85■■□□□ 1.89
TDRD3Q9H7E2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC26.85■■□□□ 1.89
TDRD3Q9H7E2 AL499627.2-201ENST00000606283 725 ntBASIC26.85■■□□□ 1.89
TDRD3Q9H7E2 RARRES2P11-201ENST00000635158 484 ntBASIC26.85■■□□□ 1.89
TDRD3Q9H7E2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
TDRD3Q9H7E2 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms