Protein–RNA interactions for Protein: Q9H3S7

PTPN23, Tyrosine-protein phosphatase non-receptor type 23, humanhuman

Predictions only

Length 1,636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23Q9H3S7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.09
PTPN23Q9H3S7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC34.32■■■■□ 3.08
PTPN23Q9H3S7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
PTPN23Q9H3S7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC34.32■■■■□ 3.08
PTPN23Q9H3S7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
PTPN23Q9H3S7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC34.31■■■■□ 3.08
PTPN23Q9H3S7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
PTPN23Q9H3S7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC34.31■■■■□ 3.08
PTPN23Q9H3S7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC34.31■■■■□ 3.08
PTPN23Q9H3S7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
PTPN23Q9H3S7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
PTPN23Q9H3S7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
PTPN23Q9H3S7 LINC00543-201ENST00000567234 1845 ntBASIC34.3■■■■□ 3.08
PTPN23Q9H3S7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC34.3■■■■□ 3.08
PTPN23Q9H3S7 BX842568.3-201ENST00000418104 571 ntBASIC34.3■■■■□ 3.08
PTPN23Q9H3S7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
PTPN23Q9H3S7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
PTPN23Q9H3S7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC34.3■■■■□ 3.08
PTPN23Q9H3S7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
PTPN23Q9H3S7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC34.3■■■■□ 3.08
PTPN23Q9H3S7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC34.3■■■■□ 3.08
PTPN23Q9H3S7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC34.29■■■■□ 3.08
PTPN23Q9H3S7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC34.29■■■■□ 3.08
PTPN23Q9H3S7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
PTPN23Q9H3S7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
PTPN23Q9H3S7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC34.29■■■■□ 3.08
PTPN23Q9H3S7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC34.28■■■■□ 3.08
PTPN23Q9H3S7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC34.28■■■■□ 3.08
PTPN23Q9H3S7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC34.28■■■■□ 3.08
PTPN23Q9H3S7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
PTPN23Q9H3S7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
PTPN23Q9H3S7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC34.27■■■■□ 3.08
PTPN23Q9H3S7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC34.27■■■■□ 3.08
PTPN23Q9H3S7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC34.27■■■■□ 3.08
PTPN23Q9H3S7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.08
PTPN23Q9H3S7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC34.26■■■■□ 3.08
PTPN23Q9H3S7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC34.26■■■■□ 3.08
PTPN23Q9H3S7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC34.26■■■■□ 3.08
PTPN23Q9H3S7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC34.26■■■■□ 3.07
PTPN23Q9H3S7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC34.26■■■■□ 3.07
PTPN23Q9H3S7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC34.26■■■■□ 3.07
PTPN23Q9H3S7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
PTPN23Q9H3S7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC34.26■■■■□ 3.07
PTPN23Q9H3S7 AC233992.3-201ENST00000607491 485 ntBASIC34.26■■■■□ 3.07
PTPN23Q9H3S7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
PTPN23Q9H3S7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC34.25■■■■□ 3.07
PTPN23Q9H3S7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC34.25■■■■□ 3.07
PTPN23Q9H3S7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC34.25■■■■□ 3.07
PTPN23Q9H3S7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC34.25■■■■□ 3.07
PTPN23Q9H3S7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC34.25■■■■□ 3.07
PTPN23Q9H3S7 AL139125.2-201ENST00000623134 1869 ntBASIC34.24■■■■□ 3.07
PTPN23Q9H3S7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC34.24■■■■□ 3.07
PTPN23Q9H3S7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
PTPN23Q9H3S7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC34.23■■■■□ 3.07
PTPN23Q9H3S7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC34.23■■■■□ 3.07
PTPN23Q9H3S7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC34.23■■■■□ 3.07
PTPN23Q9H3S7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC34.23■■■■□ 3.07
PTPN23Q9H3S7 AL499627.2-201ENST00000606283 725 ntBASIC34.23■■■■□ 3.07
PTPN23Q9H3S7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC34.23■■■■□ 3.07
PTPN23Q9H3S7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
PTPN23Q9H3S7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC34.22■■■■□ 3.07
PTPN23Q9H3S7 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC34.22■■■■□ 3.07
PTPN23Q9H3S7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
PTPN23Q9H3S7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC34.22■■■■□ 3.07
PTPN23Q9H3S7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC34.22■■■■□ 3.07
PTPN23Q9H3S7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
PTPN23Q9H3S7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC34.22■■■■□ 3.07
PTPN23Q9H3S7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC34.22■■■■□ 3.07
PTPN23Q9H3S7 LINC01124-201ENST00000409786 2117 ntBASIC34.21■■■■□ 3.07
PTPN23Q9H3S7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC34.21■■■■□ 3.07
PTPN23Q9H3S7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
PTPN23Q9H3S7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC34.21■■■■□ 3.07
PTPN23Q9H3S7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
PTPN23Q9H3S7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC34.21■■■■□ 3.07
PTPN23Q9H3S7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
PTPN23Q9H3S7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC34.21■■■■□ 3.07
PTPN23Q9H3S7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC34.2■■■■□ 3.07
PTPN23Q9H3S7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC34.2■■■■□ 3.07
PTPN23Q9H3S7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
PTPN23Q9H3S7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC34.2■■■■□ 3.07
PTPN23Q9H3S7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC34.2■■■■□ 3.07
PTPN23Q9H3S7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC34.2■■■■□ 3.07
PTPN23Q9H3S7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC34.2■■■■□ 3.07
PTPN23Q9H3S7 MPST-208ENST00000628507 698 ntTSL 5 BASIC34.2■■■■□ 3.07
PTPN23Q9H3S7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC34.2■■■■□ 3.07
PTPN23Q9H3S7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC34.2■■■■□ 3.07
PTPN23Q9H3S7 AC144652.1-201ENST00000609974 1624 ntBASIC34.2■■■■□ 3.07
PTPN23Q9H3S7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC34.2■■■■□ 3.07
PTPN23Q9H3S7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.06
PTPN23Q9H3S7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC34.19■■■■□ 3.06
PTPN23Q9H3S7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC34.19■■■■□ 3.06
PTPN23Q9H3S7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
PTPN23Q9H3S7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
PTPN23Q9H3S7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC34.18■■■■□ 3.06
PTPN23Q9H3S7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC34.18■■■■□ 3.06
PTPN23Q9H3S7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC34.18■■■■□ 3.06
PTPN23Q9H3S7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC34.18■■■■□ 3.06
PTPN23Q9H3S7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC34.18■■■■□ 3.06
PTPN23Q9H3S7 AC133637.1-201ENST00000624115 1537 ntBASIC34.18■■■■□ 3.06
PTPN23Q9H3S7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms