Protein–RNA interactions for Protein: Q9BZJ0

CRNKL1, Crooked neck-like protein 1, humanhuman

Known RBP Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1Q9BZJ0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
CRNKL1Q9BZJ0 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CRNKL1Q9BZJ0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CRNKL1Q9BZJ0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC26.87■■□□□ 1.89
CRNKL1Q9BZJ0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC26.87■■□□□ 1.89
CRNKL1Q9BZJ0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC26.87■■□□□ 1.89
CRNKL1Q9BZJ0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
CRNKL1Q9BZJ0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
CRNKL1Q9BZJ0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CRNKL1Q9BZJ0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
CRNKL1Q9BZJ0 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CRNKL1Q9BZJ0 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC26.86■■□□□ 1.89
CRNKL1Q9BZJ0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CRNKL1Q9BZJ0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CRNKL1Q9BZJ0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CRNKL1Q9BZJ0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CRNKL1Q9BZJ0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CRNKL1Q9BZJ0 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC26.86■■□□□ 1.89
CRNKL1Q9BZJ0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC26.86■■□□□ 1.89
CRNKL1Q9BZJ0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
CRNKL1Q9BZJ0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC26.85■■□□□ 1.89
CRNKL1Q9BZJ0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC26.85■■□□□ 1.89
CRNKL1Q9BZJ0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC26.85■■□□□ 1.89
CRNKL1Q9BZJ0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CRNKL1Q9BZJ0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC26.85■■□□□ 1.89
CRNKL1Q9BZJ0 pRNA.6-201ENST00000610482 90 ntBASIC26.85■■□□□ 1.89
CRNKL1Q9BZJ0 pRNA.5-201ENST00000612139 90 ntBASIC26.85■■□□□ 1.89
CRNKL1Q9BZJ0 pRNA.11-201ENST00000618423 90 ntBASIC26.85■■□□□ 1.89
CRNKL1Q9BZJ0 pRNA.13-201ENST00000619112 90 ntBASIC26.85■■□□□ 1.89
CRNKL1Q9BZJ0 AC136469.2-201ENST00000623944 1028 ntBASIC26.85■■□□□ 1.89
CRNKL1Q9BZJ0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
CRNKL1Q9BZJ0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC26.84■■□□□ 1.89
CRNKL1Q9BZJ0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC26.84■■□□□ 1.89
CRNKL1Q9BZJ0 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CRNKL1Q9BZJ0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CRNKL1Q9BZJ0 FP325331.1-202ENST00000623531 1380 ntBASIC26.84■■□□□ 1.89
CRNKL1Q9BZJ0 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CRNKL1Q9BZJ0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC26.83■■□□□ 1.89
CRNKL1Q9BZJ0 ABCB10P4-201ENST00000566803 2184 ntBASIC26.83■■□□□ 1.89
CRNKL1Q9BZJ0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CRNKL1Q9BZJ0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC26.83■■□□□ 1.89
CRNKL1Q9BZJ0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CRNKL1Q9BZJ0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CRNKL1Q9BZJ0 AP001330.3-201ENST00000520123 633 ntBASIC26.83■■□□□ 1.89
CRNKL1Q9BZJ0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CRNKL1Q9BZJ0 AF213884.3-201ENST00000563833 479 ntBASIC26.83■■□□□ 1.89
CRNKL1Q9BZJ0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.83■■□□□ 1.89
CRNKL1Q9BZJ0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
CRNKL1Q9BZJ0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CRNKL1Q9BZJ0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC26.82■■□□□ 1.88
CRNKL1Q9BZJ0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CRNKL1Q9BZJ0 EBPL-204ENST00000378272 766 ntTSL 3 BASIC26.82■■□□□ 1.88
CRNKL1Q9BZJ0 AL136967.2-201ENST00000623968 743 ntBASIC26.82■■□□□ 1.88
CRNKL1Q9BZJ0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
CRNKL1Q9BZJ0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
CRNKL1Q9BZJ0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CRNKL1Q9BZJ0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC26.81■■□□□ 1.88
CRNKL1Q9BZJ0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
CRNKL1Q9BZJ0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CRNKL1Q9BZJ0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CRNKL1Q9BZJ0 MIR939-201ENST00000401314 82 ntBASIC26.81■■□□□ 1.88
CRNKL1Q9BZJ0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC26.81■■□□□ 1.88
CRNKL1Q9BZJ0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC26.81■■□□□ 1.88
CRNKL1Q9BZJ0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC26.81■■□□□ 1.88
CRNKL1Q9BZJ0 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CRNKL1Q9BZJ0 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC26.81■■□□□ 1.88
CRNKL1Q9BZJ0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CRNKL1Q9BZJ0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CRNKL1Q9BZJ0 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CRNKL1Q9BZJ0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CRNKL1Q9BZJ0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CRNKL1Q9BZJ0 AC144652.1-201ENST00000609974 1624 ntBASIC26.8■■□□□ 1.88
CRNKL1Q9BZJ0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC26.8■■□□□ 1.88
CRNKL1Q9BZJ0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC26.8■■□□□ 1.88
CRNKL1Q9BZJ0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC26.8■■□□□ 1.88
CRNKL1Q9BZJ0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC26.79■■□□□ 1.88
CRNKL1Q9BZJ0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
CRNKL1Q9BZJ0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CRNKL1Q9BZJ0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC26.79■■□□□ 1.88
CRNKL1Q9BZJ0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
CRNKL1Q9BZJ0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC26.79■■□□□ 1.88
CRNKL1Q9BZJ0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
CRNKL1Q9BZJ0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
CRNKL1Q9BZJ0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC26.79■■□□□ 1.88
CRNKL1Q9BZJ0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
CRNKL1Q9BZJ0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CRNKL1Q9BZJ0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CRNKL1Q9BZJ0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CRNKL1Q9BZJ0 DUX4L4-201ENST00000566884 1269 ntBASIC26.78■■□□□ 1.88
CRNKL1Q9BZJ0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC26.78■■□□□ 1.88
CRNKL1Q9BZJ0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC26.78■■□□□ 1.88
CRNKL1Q9BZJ0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CRNKL1Q9BZJ0 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CRNKL1Q9BZJ0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
CRNKL1Q9BZJ0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CRNKL1Q9BZJ0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CRNKL1Q9BZJ0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC26.77■■□□□ 1.88
CRNKL1Q9BZJ0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC26.77■■□□□ 1.88
CRNKL1Q9BZJ0 AC091305.1-201ENST00000479476 895 ntBASIC26.77■■□□□ 1.88
CRNKL1Q9BZJ0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC26.77■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms