Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 AL137060.1-201ENST00000618151 2648 ntBASIC19.5■□□□□ 0.71
GFI1Q99684 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
GFI1Q99684 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
GFI1Q99684 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GFI1Q99684 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
GFI1Q99684 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
GFI1Q99684 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GFI1Q99684 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
GFI1Q99684 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.49■□□□□ 0.71
GFI1Q99684 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.49■□□□□ 0.71
GFI1Q99684 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GFI1Q99684 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
GFI1Q99684 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.49■□□□□ 0.71
GFI1Q99684 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GFI1Q99684 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
GFI1Q99684 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.49■□□□□ 0.71
GFI1Q99684 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GFI1Q99684 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GFI1Q99684 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
GFI1Q99684 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.48■□□□□ 0.71
GFI1Q99684 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.48■□□□□ 0.71
GFI1Q99684 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GFI1Q99684 AL592293.1-201ENST00000502889 1188 ntBASIC19.48■□□□□ 0.71
GFI1Q99684 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
GFI1Q99684 AC018755.3-202ENST00000596210 929 ntBASIC19.48■□□□□ 0.71
GFI1Q99684 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GFI1Q99684 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
GFI1Q99684 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
GFI1Q99684 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
GFI1Q99684 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
GFI1Q99684 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.48■□□□□ 0.71
GFI1Q99684 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GFI1Q99684 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
GFI1Q99684 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
GFI1Q99684 AL024507.2-201ENST00000606070 2574 ntBASIC19.47■□□□□ 0.71
GFI1Q99684 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GFI1Q99684 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GFI1Q99684 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GFI1Q99684 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GFI1Q99684 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
GFI1Q99684 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GFI1Q99684 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.47■□□□□ 0.71
GFI1Q99684 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GFI1Q99684 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.47■□□□□ 0.71
GFI1Q99684 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GFI1Q99684 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GFI1Q99684 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
GFI1Q99684 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GFI1Q99684 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
GFI1Q99684 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GFI1Q99684 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GFI1Q99684 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.46■□□□□ 0.71
GFI1Q99684 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GFI1Q99684 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.46■□□□□ 0.71
GFI1Q99684 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.46■□□□□ 0.71
GFI1Q99684 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.46■□□□□ 0.71
GFI1Q99684 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
GFI1Q99684 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GFI1Q99684 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
GFI1Q99684 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GFI1Q99684 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
GFI1Q99684 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GFI1Q99684 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GFI1Q99684 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
GFI1Q99684 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GFI1Q99684 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GFI1Q99684 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
GFI1Q99684 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GFI1Q99684 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
GFI1Q99684 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GFI1Q99684 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
GFI1Q99684 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GFI1Q99684 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
GFI1Q99684 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
GFI1Q99684 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.45■□□□□ 0.7
GFI1Q99684 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GFI1Q99684 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GFI1Q99684 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GFI1Q99684 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
GFI1Q99684 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
GFI1Q99684 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GFI1Q99684 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GFI1Q99684 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GFI1Q99684 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GFI1Q99684 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.44■□□□□ 0.7
GFI1Q99684 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GFI1Q99684 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
GFI1Q99684 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GFI1Q99684 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GFI1Q99684 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.43■□□□□ 0.7
GFI1Q99684 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GFI1Q99684 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GFI1Q99684 LONRF2P2-201ENST00000439212 571 ntBASIC19.43■□□□□ 0.7
GFI1Q99684 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GFI1Q99684 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
GFI1Q99684 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GFI1Q99684 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GFI1Q99684 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.42■□□□□ 0.7
GFI1Q99684 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
GFI1Q99684 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms