Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC32.7■■■□□ 2.83
SCAF11Q99590 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC32.7■■■□□ 2.83
SCAF11Q99590 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
SCAF11Q99590 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC32.7■■■□□ 2.82
SCAF11Q99590 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC32.7■■■□□ 2.82
SCAF11Q99590 LSR-205ENST00000427250 1606 ntTSL 2 BASIC32.7■■■□□ 2.82
SCAF11Q99590 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC32.7■■■□□ 2.82
SCAF11Q99590 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
SCAF11Q99590 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
SCAF11Q99590 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC32.69■■■□□ 2.82
SCAF11Q99590 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC32.69■■■□□ 2.82
SCAF11Q99590 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC32.69■■■□□ 2.82
SCAF11Q99590 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC32.68■■■□□ 2.82
SCAF11Q99590 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
SCAF11Q99590 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC32.67■■■□□ 2.82
SCAF11Q99590 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
SCAF11Q99590 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC32.67■■■□□ 2.82
SCAF11Q99590 CREM-210ENST00000374721 2020 ntTSL 5 BASIC32.67■■■□□ 2.82
SCAF11Q99590 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
SCAF11Q99590 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC32.66■■■□□ 2.82
SCAF11Q99590 AL022069.1-201ENST00000568025 1636 ntBASIC32.66■■■□□ 2.82
SCAF11Q99590 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
SCAF11Q99590 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC32.66■■■□□ 2.82
SCAF11Q99590 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC32.66■■■□□ 2.82
SCAF11Q99590 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
SCAF11Q99590 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC32.66■■■□□ 2.82
SCAF11Q99590 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC32.66■■■□□ 2.82
SCAF11Q99590 RAP2CP1-201ENST00000605103 478 ntBASIC32.66■■■□□ 2.82
SCAF11Q99590 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC32.65■■■□□ 2.82
SCAF11Q99590 TK2-208ENST00000545043 1120 ntTSL 2 BASIC32.65■■■□□ 2.82
SCAF11Q99590 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC32.64■■■□□ 2.82
SCAF11Q99590 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC32.64■■■□□ 2.82
SCAF11Q99590 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
SCAF11Q99590 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC32.64■■■□□ 2.82
SCAF11Q99590 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
SCAF11Q99590 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.81
SCAF11Q99590 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
SCAF11Q99590 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
SCAF11Q99590 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
SCAF11Q99590 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC32.63■■■□□ 2.81
SCAF11Q99590 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
SCAF11Q99590 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC32.63■■■□□ 2.81
SCAF11Q99590 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC32.63■■■□□ 2.81
SCAF11Q99590 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
SCAF11Q99590 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
SCAF11Q99590 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
SCAF11Q99590 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
SCAF11Q99590 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC32.62■■■□□ 2.81
SCAF11Q99590 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC32.62■■■□□ 2.81
SCAF11Q99590 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC32.61■■■□□ 2.81
SCAF11Q99590 ABHD17AP1-201ENST00000358206 933 ntBASIC32.61■■■□□ 2.81
SCAF11Q99590 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC32.61■■■□□ 2.81
SCAF11Q99590 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
SCAF11Q99590 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
SCAF11Q99590 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
SCAF11Q99590 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC32.61■■■□□ 2.81
SCAF11Q99590 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC32.61■■■□□ 2.81
SCAF11Q99590 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC32.61■■■□□ 2.81
SCAF11Q99590 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC32.61■■■□□ 2.81
SCAF11Q99590 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
SCAF11Q99590 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC32.6■■■□□ 2.81
SCAF11Q99590 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC32.6■■■□□ 2.81
SCAF11Q99590 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC32.6■■■□□ 2.81
SCAF11Q99590 EMC9-206ENST00000560403 872 ntTSL 2 BASIC32.6■■■□□ 2.81
SCAF11Q99590 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
SCAF11Q99590 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
SCAF11Q99590 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC32.59■■■□□ 2.81
SCAF11Q99590 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC32.59■■■□□ 2.81
SCAF11Q99590 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC32.59■■■□□ 2.81
SCAF11Q99590 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
SCAF11Q99590 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
SCAF11Q99590 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
SCAF11Q99590 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC32.58■■■□□ 2.81
SCAF11Q99590 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
SCAF11Q99590 LINC02228-203ENST00000641970 1355 ntBASIC32.58■■■□□ 2.81
SCAF11Q99590 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC32.58■■■□□ 2.81
SCAF11Q99590 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC32.58■■■□□ 2.81
SCAF11Q99590 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC32.58■■■□□ 2.81
SCAF11Q99590 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
SCAF11Q99590 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
SCAF11Q99590 KRT18P61-201ENST00000585825 1298 ntBASIC32.58■■■□□ 2.81
SCAF11Q99590 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC32.58■■■□□ 2.81
SCAF11Q99590 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
SCAF11Q99590 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC32.57■■■□□ 2.8
SCAF11Q99590 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
SCAF11Q99590 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
SCAF11Q99590 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
SCAF11Q99590 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC32.57■■■□□ 2.8
SCAF11Q99590 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
SCAF11Q99590 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
SCAF11Q99590 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
SCAF11Q99590 AC006015.1-201ENST00000429970 570 ntBASIC32.56■■■□□ 2.8
SCAF11Q99590 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC32.56■■■□□ 2.8
SCAF11Q99590 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
SCAF11Q99590 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
SCAF11Q99590 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
SCAF11Q99590 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
SCAF11Q99590 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
SCAF11Q99590 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC32.55■■■□□ 2.8
SCAF11Q99590 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC32.55■■■□□ 2.8
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms