Protein–RNA interactions for Protein: Q96NJ6

ZFP3, Zinc finger protein 3 homolog, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFP3Q96NJ6 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
ZFP3Q96NJ6 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZFP3Q96NJ6 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
ZFP3Q96NJ6 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.48■□□□□ 0.87
ZFP3Q96NJ6 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZFP3Q96NJ6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZFP3Q96NJ6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZFP3Q96NJ6 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZFP3Q96NJ6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
ZFP3Q96NJ6 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZFP3Q96NJ6 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZFP3Q96NJ6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZFP3Q96NJ6 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
ZFP3Q96NJ6 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ZFP3Q96NJ6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
ZFP3Q96NJ6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZFP3Q96NJ6 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZFP3Q96NJ6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZFP3Q96NJ6 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.48■□□□□ 0.87
ZFP3Q96NJ6 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
ZFP3Q96NJ6 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
ZFP3Q96NJ6 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.47■□□□□ 0.87
ZFP3Q96NJ6 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.47■□□□□ 0.87
ZFP3Q96NJ6 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.47■□□□□ 0.87
ZFP3Q96NJ6 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ZFP3Q96NJ6 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ZFP3Q96NJ6 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZFP3Q96NJ6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.47■□□□□ 0.87
ZFP3Q96NJ6 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ZFP3Q96NJ6 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ZFP3Q96NJ6 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZFP3Q96NJ6 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.47■□□□□ 0.87
ZFP3Q96NJ6 MIR4466-201ENST00000606121 54 ntBASIC20.47■□□□□ 0.87
ZFP3Q96NJ6 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ZFP3Q96NJ6 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.47■□□□□ 0.87
ZFP3Q96NJ6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZFP3Q96NJ6 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZFP3Q96NJ6 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZFP3Q96NJ6 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.46■□□□□ 0.87
ZFP3Q96NJ6 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.46■□□□□ 0.87
ZFP3Q96NJ6 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.46■□□□□ 0.87
ZFP3Q96NJ6 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
ZFP3Q96NJ6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZFP3Q96NJ6 AL022069.1-201ENST00000568025 1636 ntBASIC20.45■□□□□ 0.87
ZFP3Q96NJ6 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZFP3Q96NJ6 CLDN5-201ENST00000403084 2357 ntBASIC20.45■□□□□ 0.86
ZFP3Q96NJ6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZFP3Q96NJ6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZFP3Q96NJ6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZFP3Q96NJ6 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
ZFP3Q96NJ6 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ZFP3Q96NJ6 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
ZFP3Q96NJ6 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZFP3Q96NJ6 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZFP3Q96NJ6 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ZFP3Q96NJ6 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.44■□□□□ 0.86
ZFP3Q96NJ6 AC141586.4-201ENST00000624558 1573 ntBASIC20.44■□□□□ 0.86
ZFP3Q96NJ6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
ZFP3Q96NJ6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZFP3Q96NJ6 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ZFP3Q96NJ6 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZFP3Q96NJ6 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ZFP3Q96NJ6 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZFP3Q96NJ6 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZFP3Q96NJ6 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZFP3Q96NJ6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
ZFP3Q96NJ6 AL161729.1-201ENST00000604104 1402 ntBASIC20.44■□□□□ 0.86
ZFP3Q96NJ6 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
ZFP3Q96NJ6 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
ZFP3Q96NJ6 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZFP3Q96NJ6 AC131274.2-201ENST00000580697 1507 ntBASIC20.43■□□□□ 0.86
ZFP3Q96NJ6 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.43■□□□□ 0.86
ZFP3Q96NJ6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.43■□□□□ 0.86
ZFP3Q96NJ6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.43■□□□□ 0.86
ZFP3Q96NJ6 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.43■□□□□ 0.86
ZFP3Q96NJ6 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.43■□□□□ 0.86
ZFP3Q96NJ6 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.43■□□□□ 0.86
ZFP3Q96NJ6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ZFP3Q96NJ6 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZFP3Q96NJ6 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZFP3Q96NJ6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
ZFP3Q96NJ6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
ZFP3Q96NJ6 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ZFP3Q96NJ6 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZFP3Q96NJ6 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZFP3Q96NJ6 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZFP3Q96NJ6 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZFP3Q96NJ6 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZFP3Q96NJ6 MIR638-201ENST00000385237 100 ntBASIC20.42■□□□□ 0.86
ZFP3Q96NJ6 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ZFP3Q96NJ6 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.42■□□□□ 0.86
ZFP3Q96NJ6 PKD1P6-201ENST00000343738 4769 ntBASIC20.42■□□□□ 0.86
ZFP3Q96NJ6 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
ZFP3Q96NJ6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.42■□□□□ 0.86
ZFP3Q96NJ6 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZFP3Q96NJ6 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ZFP3Q96NJ6 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
ZFP3Q96NJ6 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.42■□□□□ 0.86
ZFP3Q96NJ6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZFP3Q96NJ6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms