Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 MIR638-201ENST00000385237 100 ntBASIC23.26■■□□□ 1.31
PRICKLE1Q96MT3 AC099791.2-201ENST00000605725 427 ntBASIC23.26■■□□□ 1.31
PRICKLE1Q96MT3 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PRICKLE1Q96MT3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PRICKLE1Q96MT3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
PRICKLE1Q96MT3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PRICKLE1Q96MT3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PRICKLE1Q96MT3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PRICKLE1Q96MT3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PRICKLE1Q96MT3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PRICKLE1Q96MT3 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PRICKLE1Q96MT3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PRICKLE1Q96MT3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PRICKLE1Q96MT3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PRICKLE1Q96MT3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
PRICKLE1Q96MT3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.25■■□□□ 1.31
PRICKLE1Q96MT3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
PRICKLE1Q96MT3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PRICKLE1Q96MT3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
PRICKLE1Q96MT3 UNC93B3-201ENST00000308076 687 ntBASIC23.24■■□□□ 1.31
PRICKLE1Q96MT3 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.24■■□□□ 1.31
PRICKLE1Q96MT3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.24■■□□□ 1.31
PRICKLE1Q96MT3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PRICKLE1Q96MT3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
PRICKLE1Q96MT3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
PRICKLE1Q96MT3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PRICKLE1Q96MT3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PRICKLE1Q96MT3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PRICKLE1Q96MT3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PRICKLE1Q96MT3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
PRICKLE1Q96MT3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.23■■□□□ 1.31
PRICKLE1Q96MT3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
PRICKLE1Q96MT3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PRICKLE1Q96MT3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.22■■□□□ 1.31
PRICKLE1Q96MT3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PRICKLE1Q96MT3 AC006455.2-201ENST00000429931 906 ntBASIC23.22■■□□□ 1.31
PRICKLE1Q96MT3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.22■■□□□ 1.31
PRICKLE1Q96MT3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PRICKLE1Q96MT3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.22■■□□□ 1.31
PRICKLE1Q96MT3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PRICKLE1Q96MT3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.22■■□□□ 1.31
PRICKLE1Q96MT3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.22■■□□□ 1.31
PRICKLE1Q96MT3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.22■■□□□ 1.31
PRICKLE1Q96MT3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PRICKLE1Q96MT3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PRICKLE1Q96MT3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PRICKLE1Q96MT3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.21■■□□□ 1.31
PRICKLE1Q96MT3 AL136162.1-201ENST00000607711 1078 ntBASIC23.21■■□□□ 1.31
PRICKLE1Q96MT3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PRICKLE1Q96MT3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PRICKLE1Q96MT3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PRICKLE1Q96MT3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PRICKLE1Q96MT3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
PRICKLE1Q96MT3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PRICKLE1Q96MT3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.2■■□□□ 1.3
PRICKLE1Q96MT3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PRICKLE1Q96MT3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PRICKLE1Q96MT3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PRICKLE1Q96MT3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.2■■□□□ 1.3
PRICKLE1Q96MT3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PRICKLE1Q96MT3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRICKLE1Q96MT3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PRICKLE1Q96MT3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRICKLE1Q96MT3 SERBP1P1-201ENST00000396021 1160 ntBASIC23.19■■□□□ 1.3
PRICKLE1Q96MT3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.19■■□□□ 1.3
PRICKLE1Q96MT3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRICKLE1Q96MT3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PRICKLE1Q96MT3 AC106739.1-201ENST00000617035 715 ntBASIC23.19■■□□□ 1.3
PRICKLE1Q96MT3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.19■■□□□ 1.3
PRICKLE1Q96MT3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRICKLE1Q96MT3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRICKLE1Q96MT3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRICKLE1Q96MT3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.19■■□□□ 1.3
PRICKLE1Q96MT3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
PRICKLE1Q96MT3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PRICKLE1Q96MT3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PRICKLE1Q96MT3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRICKLE1Q96MT3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
PRICKLE1Q96MT3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRICKLE1Q96MT3 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.18■■□□□ 1.3
PRICKLE1Q96MT3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.18■■□□□ 1.3
PRICKLE1Q96MT3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.18■■□□□ 1.3
PRICKLE1Q96MT3 PBX2P1-201ENST00000493219 1291 ntBASIC23.18■■□□□ 1.3
PRICKLE1Q96MT3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.18■■□□□ 1.3
PRICKLE1Q96MT3 AC024257.2-201ENST00000549699 147 ntBASIC23.18■■□□□ 1.3
PRICKLE1Q96MT3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
PRICKLE1Q96MT3 AC009086.3-201ENST00000623486 1008 ntBASIC23.18■■□□□ 1.3
PRICKLE1Q96MT3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.18■■□□□ 1.3
PRICKLE1Q96MT3 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRICKLE1Q96MT3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRICKLE1Q96MT3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRICKLE1Q96MT3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRICKLE1Q96MT3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
PRICKLE1Q96MT3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
PRICKLE1Q96MT3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRICKLE1Q96MT3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRICKLE1Q96MT3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRICKLE1Q96MT3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PRICKLE1Q96MT3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.17■■□□□ 1.3
PRICKLE1Q96MT3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms