Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MS4A3Q96HJ5 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.05■□□□□ 0.8
MS4A3Q96HJ5 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MS4A3Q96HJ5 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.05■□□□□ 0.8
MS4A3Q96HJ5 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.05■□□□□ 0.8
MS4A3Q96HJ5 AC010326.4-201ENST00000604665 891 ntBASIC20.05■□□□□ 0.8
MS4A3Q96HJ5 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.05■□□□□ 0.8
MS4A3Q96HJ5 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
MS4A3Q96HJ5 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.05■□□□□ 0.8
MS4A3Q96HJ5 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MS4A3Q96HJ5 RN7SL832P-201ENST00000607781 1756 ntBASIC20.05■□□□□ 0.8
MS4A3Q96HJ5 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
MS4A3Q96HJ5 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MS4A3Q96HJ5 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
MS4A3Q96HJ5 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MS4A3Q96HJ5 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.04■□□□□ 0.8
MS4A3Q96HJ5 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MS4A3Q96HJ5 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.04■□□□□ 0.8
MS4A3Q96HJ5 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MS4A3Q96HJ5 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC20.04■□□□□ 0.8
MS4A3Q96HJ5 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.04■□□□□ 0.8
MS4A3Q96HJ5 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MS4A3Q96HJ5 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MS4A3Q96HJ5 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
MS4A3Q96HJ5 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MS4A3Q96HJ5 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.04■□□□□ 0.8
MS4A3Q96HJ5 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MS4A3Q96HJ5 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.03■□□□□ 0.8
MS4A3Q96HJ5 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MS4A3Q96HJ5 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MS4A3Q96HJ5 EP400NL-214ENST00000641289 2402 ntBASIC20.03■□□□□ 0.8
MS4A3Q96HJ5 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.03■□□□□ 0.8
MS4A3Q96HJ5 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.03■□□□□ 0.8
MS4A3Q96HJ5 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
MS4A3Q96HJ5 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.03■□□□□ 0.8
MS4A3Q96HJ5 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MS4A3Q96HJ5 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MS4A3Q96HJ5 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.03■□□□□ 0.8
MS4A3Q96HJ5 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.03■□□□□ 0.8
MS4A3Q96HJ5 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.03■□□□□ 0.8
MS4A3Q96HJ5 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
MS4A3Q96HJ5 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
MS4A3Q96HJ5 AL117328.2-201ENST00000624617 1940 ntBASIC20.03■□□□□ 0.8
MS4A3Q96HJ5 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MS4A3Q96HJ5 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
MS4A3Q96HJ5 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
MS4A3Q96HJ5 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
MS4A3Q96HJ5 LINC00565-201ENST00000562710 2331 ntBASIC20.03■□□□□ 0.8
MS4A3Q96HJ5 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.03■□□□□ 0.8
MS4A3Q96HJ5 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
MS4A3Q96HJ5 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
MS4A3Q96HJ5 AC004812.2-201ENST00000611079 2094 ntBASIC20.03■□□□□ 0.8
MS4A3Q96HJ5 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A3Q96HJ5 UNC93B8-201ENST00000511903 705 ntBASIC20.02■□□□□ 0.8
MS4A3Q96HJ5 SNX5-217ENST00000606557 1087 ntBASIC20.02■□□□□ 0.8
MS4A3Q96HJ5 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A3Q96HJ5 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.02■□□□□ 0.8
MS4A3Q96HJ5 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A3Q96HJ5 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MS4A3Q96HJ5 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
MS4A3Q96HJ5 AL022069.1-201ENST00000568025 1636 ntBASIC20.02■□□□□ 0.79
MS4A3Q96HJ5 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
MS4A3Q96HJ5 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MS4A3Q96HJ5 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.01■□□□□ 0.79
MS4A3Q96HJ5 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.01■□□□□ 0.79
MS4A3Q96HJ5 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
MS4A3Q96HJ5 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MS4A3Q96HJ5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
MS4A3Q96HJ5 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.01■□□□□ 0.79
MS4A3Q96HJ5 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MS4A3Q96HJ5 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
MS4A3Q96HJ5 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MS4A3Q96HJ5 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MS4A3Q96HJ5 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
MS4A3Q96HJ5 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MS4A3Q96HJ5 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20■□□□□ 0.79
MS4A3Q96HJ5 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20■□□□□ 0.79
MS4A3Q96HJ5 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MS4A3Q96HJ5 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MS4A3Q96HJ5 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
MS4A3Q96HJ5 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
MS4A3Q96HJ5 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC20■□□□□ 0.79
MS4A3Q96HJ5 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MS4A3Q96HJ5 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MS4A3Q96HJ5 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.99■□□□□ 0.79
MS4A3Q96HJ5 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
MS4A3Q96HJ5 AC004448.1-201ENST00000458332 883 ntBASIC19.99■□□□□ 0.79
MS4A3Q96HJ5 AC091917.2-201ENST00000505002 744 ntBASIC19.99■□□□□ 0.79
MS4A3Q96HJ5 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC19.99■□□□□ 0.79
MS4A3Q96HJ5 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MS4A3Q96HJ5 AL024507.2-201ENST00000606070 2574 ntBASIC19.99■□□□□ 0.79
MS4A3Q96HJ5 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.99■□□□□ 0.79
MS4A3Q96HJ5 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.99■□□□□ 0.79
MS4A3Q96HJ5 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.99■□□□□ 0.79
MS4A3Q96HJ5 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MS4A3Q96HJ5 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.99■□□□□ 0.79
MS4A3Q96HJ5 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MS4A3Q96HJ5 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
MS4A3Q96HJ5 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.98■□□□□ 0.79
MS4A3Q96HJ5 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms