Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
HPS1Q92902 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.32■□□□□ 0.84
HPS1Q92902 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HPS1Q92902 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HPS1Q92902 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.32■□□□□ 0.84
HPS1Q92902 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
HPS1Q92902 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HPS1Q92902 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HPS1Q92902 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HPS1Q92902 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HPS1Q92902 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HPS1Q92902 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
HPS1Q92902 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HPS1Q92902 MIR4508-201ENST00000584178 70 ntBASIC20.31■□□□□ 0.84
HPS1Q92902 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.31■□□□□ 0.84
HPS1Q92902 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HPS1Q92902 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HPS1Q92902 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HPS1Q92902 AC073130.3-201ENST00000624389 2278 ntBASIC20.3■□□□□ 0.84
HPS1Q92902 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HPS1Q92902 KRT8P33-201ENST00000508125 1423 ntBASIC20.3■□□□□ 0.84
HPS1Q92902 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HPS1Q92902 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.3■□□□□ 0.84
HPS1Q92902 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
HPS1Q92902 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.3■□□□□ 0.84
HPS1Q92902 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HPS1Q92902 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
HPS1Q92902 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.3■□□□□ 0.84
HPS1Q92902 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
HPS1Q92902 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS1Q92902 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HPS1Q92902 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
HPS1Q92902 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HPS1Q92902 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
HPS1Q92902 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS1Q92902 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
HPS1Q92902 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HPS1Q92902 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
HPS1Q92902 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HPS1Q92902 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
HPS1Q92902 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HPS1Q92902 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HPS1Q92902 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HPS1Q92902 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HPS1Q92902 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.28■□□□□ 0.84
HPS1Q92902 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HPS1Q92902 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.28■□□□□ 0.84
HPS1Q92902 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.28■□□□□ 0.84
HPS1Q92902 AC103834.1-201ENST00000520383 144 ntBASIC20.28■□□□□ 0.84
HPS1Q92902 AC019171.1-201ENST00000601251 1056 ntBASIC20.28■□□□□ 0.84
HPS1Q92902 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
HPS1Q92902 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.28■□□□□ 0.84
HPS1Q92902 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HPS1Q92902 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HPS1Q92902 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.28■□□□□ 0.84
HPS1Q92902 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HPS1Q92902 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HPS1Q92902 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
HPS1Q92902 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
HPS1Q92902 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HPS1Q92902 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HPS1Q92902 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
HPS1Q92902 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
HPS1Q92902 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HPS1Q92902 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.27■□□□□ 0.84
HPS1Q92902 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
HPS1Q92902 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HPS1Q92902 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.27■□□□□ 0.84
HPS1Q92902 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
HPS1Q92902 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.27■□□□□ 0.83
HPS1Q92902 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.27■□□□□ 0.83
HPS1Q92902 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HPS1Q92902 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
HPS1Q92902 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HPS1Q92902 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HPS1Q92902 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HPS1Q92902 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HPS1Q92902 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.26■□□□□ 0.83
HPS1Q92902 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
HPS1Q92902 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HPS1Q92902 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.26■□□□□ 0.83
HPS1Q92902 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HPS1Q92902 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HPS1Q92902 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
HPS1Q92902 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HPS1Q92902 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HPS1Q92902 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HPS1Q92902 PVT1_1.1-201ENST00000615125 194 ntBASIC20.25■□□□□ 0.83
HPS1Q92902 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
HPS1Q92902 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HPS1Q92902 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HPS1Q92902 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HPS1Q92902 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HPS1Q92902 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.25■□□□□ 0.83
HPS1Q92902 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HPS1Q92902 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HPS1Q92902 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HPS1Q92902 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HPS1Q92902 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HPS1Q92902 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms