Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SNED1Q8TER0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SNED1Q8TER0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC27.78■■■□□ 2.04
SNED1Q8TER0 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC27.78■■■□□ 2.04
SNED1Q8TER0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SNED1Q8TER0 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SNED1Q8TER0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
SNED1Q8TER0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC27.77■■■□□ 2.04
SNED1Q8TER0 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SNED1Q8TER0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
SNED1Q8TER0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC27.77■■■□□ 2.04
SNED1Q8TER0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC27.77■■■□□ 2.04
SNED1Q8TER0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC27.76■■■□□ 2.04
SNED1Q8TER0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC27.76■■■□□ 2.04
SNED1Q8TER0 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC27.76■■■□□ 2.04
SNED1Q8TER0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC27.76■■■□□ 2.04
SNED1Q8TER0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC27.76■■■□□ 2.04
SNED1Q8TER0 KRT18P14-201ENST00000534205 1250 ntBASIC27.76■■■□□ 2.04
SNED1Q8TER0 AC145676.1-201ENST00000514988 2004 ntBASIC27.75■■■□□ 2.03
SNED1Q8TER0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC27.75■■■□□ 2.03
SNED1Q8TER0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC27.75■■■□□ 2.03
SNED1Q8TER0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC27.75■■■□□ 2.03
SNED1Q8TER0 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC27.75■■■□□ 2.03
SNED1Q8TER0 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
SNED1Q8TER0 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
SNED1Q8TER0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
SNED1Q8TER0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC27.74■■■□□ 2.03
SNED1Q8TER0 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
SNED1Q8TER0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
SNED1Q8TER0 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
SNED1Q8TER0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC27.73■■■□□ 2.03
SNED1Q8TER0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC27.73■■■□□ 2.03
SNED1Q8TER0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
SNED1Q8TER0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC27.73■■■□□ 2.03
SNED1Q8TER0 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC27.73■■■□□ 2.03
SNED1Q8TER0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
SNED1Q8TER0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC27.73■■■□□ 2.03
SNED1Q8TER0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
SNED1Q8TER0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC27.72■■■□□ 2.03
SNED1Q8TER0 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
SNED1Q8TER0 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
SNED1Q8TER0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
SNED1Q8TER0 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC27.72■■■□□ 2.03
SNED1Q8TER0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC27.72■■■□□ 2.03
SNED1Q8TER0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC27.72■■■□□ 2.03
SNED1Q8TER0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC27.72■■■□□ 2.03
SNED1Q8TER0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
SNED1Q8TER0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
SNED1Q8TER0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
SNED1Q8TER0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
SNED1Q8TER0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC27.71■■■□□ 2.03
SNED1Q8TER0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
SNED1Q8TER0 RAP2CP1-201ENST00000605103 478 ntBASIC27.71■■■□□ 2.03
SNED1Q8TER0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
SNED1Q8TER0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
SNED1Q8TER0 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
SNED1Q8TER0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
SNED1Q8TER0 AC010525.1-201ENST00000585559 441 ntBASIC27.7■■■□□ 2.03
SNED1Q8TER0 ALDH1A3-203ENST00000557963 1670 ntBASIC27.7■■■□□ 2.02
SNED1Q8TER0 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
SNED1Q8TER0 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC27.7■■■□□ 2.02
SNED1Q8TER0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC27.7■■■□□ 2.02
SNED1Q8TER0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC27.69■■■□□ 2.02
SNED1Q8TER0 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
SNED1Q8TER0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC27.69■■■□□ 2.02
SNED1Q8TER0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC27.69■■■□□ 2.02
SNED1Q8TER0 OR2I1P-207ENST00000453522 948 ntBASIC27.69■■■□□ 2.02
SNED1Q8TER0 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC27.69■■■□□ 2.02
SNED1Q8TER0 NTF6G-201ENST00000591094 616 ntBASIC27.69■■■□□ 2.02
SNED1Q8TER0 AL499627.2-201ENST00000606283 725 ntBASIC27.69■■■□□ 2.02
SNED1Q8TER0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
SNED1Q8TER0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
SNED1Q8TER0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC27.69■■■□□ 2.02
SNED1Q8TER0 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC27.69■■■□□ 2.02
SNED1Q8TER0 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC27.69■■■□□ 2.02
SNED1Q8TER0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC27.68■■■□□ 2.02
SNED1Q8TER0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC27.68■■■□□ 2.02
SNED1Q8TER0 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC27.68■■■□□ 2.02
SNED1Q8TER0 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC27.68■■■□□ 2.02
SNED1Q8TER0 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
SNED1Q8TER0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
SNED1Q8TER0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
SNED1Q8TER0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC27.68■■■□□ 2.02
SNED1Q8TER0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC27.68■■■□□ 2.02
SNED1Q8TER0 AC133637.1-201ENST00000624115 1537 ntBASIC27.68■■■□□ 2.02
SNED1Q8TER0 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
SNED1Q8TER0 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
SNED1Q8TER0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC27.67■■■□□ 2.02
SNED1Q8TER0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
SNED1Q8TER0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SNED1Q8TER0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
SNED1Q8TER0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
SNED1Q8TER0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC27.67■■■□□ 2.02
SNED1Q8TER0 HLA-L-211ENST00000482052 1765 ntBASIC27.67■■■□□ 2.02
SNED1Q8TER0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
SNED1Q8TER0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC27.67■■■□□ 2.02
SNED1Q8TER0 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
SNED1Q8TER0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC27.66■■■□□ 2.02
SNED1Q8TER0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
SNED1Q8TER0 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms