Protein–RNA interactions for Protein: Q8NG48

LINS1, Protein Lines homolog 1, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1Q8NG48 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
LINS1Q8NG48 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
LINS1Q8NG48 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC28.35■■■□□ 2.13
LINS1Q8NG48 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC28.35■■■□□ 2.13
LINS1Q8NG48 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC28.35■■■□□ 2.13
LINS1Q8NG48 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
LINS1Q8NG48 AL355001.2-201ENST00000620617 1191 ntBASIC28.35■■■□□ 2.13
LINS1Q8NG48 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
LINS1Q8NG48 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC28.34■■■□□ 2.13
LINS1Q8NG48 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC28.34■■■□□ 2.13
LINS1Q8NG48 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
LINS1Q8NG48 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
LINS1Q8NG48 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
LINS1Q8NG48 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
LINS1Q8NG48 FP325331.1-202ENST00000623531 1380 ntBASIC28.34■■■□□ 2.13
LINS1Q8NG48 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC28.34■■■□□ 2.13
LINS1Q8NG48 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
LINS1Q8NG48 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
LINS1Q8NG48 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
LINS1Q8NG48 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
LINS1Q8NG48 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC28.33■■■□□ 2.13
LINS1Q8NG48 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC28.33■■■□□ 2.13
LINS1Q8NG48 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC28.33■■■□□ 2.13
LINS1Q8NG48 AC136469.2-201ENST00000623944 1028 ntBASIC28.33■■■□□ 2.13
LINS1Q8NG48 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC28.33■■■□□ 2.13
LINS1Q8NG48 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
LINS1Q8NG48 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
LINS1Q8NG48 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
LINS1Q8NG48 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
LINS1Q8NG48 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC28.33■■■□□ 2.12
LINS1Q8NG48 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
LINS1Q8NG48 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
LINS1Q8NG48 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
LINS1Q8NG48 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
LINS1Q8NG48 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC28.32■■■□□ 2.12
LINS1Q8NG48 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC28.32■■■□□ 2.12
LINS1Q8NG48 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
LINS1Q8NG48 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
LINS1Q8NG48 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
LINS1Q8NG48 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC28.31■■■□□ 2.12
LINS1Q8NG48 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
LINS1Q8NG48 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
LINS1Q8NG48 AC144652.1-201ENST00000609974 1624 ntBASIC28.31■■■□□ 2.12
LINS1Q8NG48 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC28.31■■■□□ 2.12
LINS1Q8NG48 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
LINS1Q8NG48 AC142381.2-201ENST00000566120 298 ntBASIC28.3■■■□□ 2.12
LINS1Q8NG48 pRNA.6-201ENST00000610482 90 ntBASIC28.3■■■□□ 2.12
LINS1Q8NG48 pRNA.5-201ENST00000612139 90 ntBASIC28.3■■■□□ 2.12
LINS1Q8NG48 GRAMD4P4-201ENST00000613563 1115 ntBASIC28.3■■■□□ 2.12
LINS1Q8NG48 pRNA.11-201ENST00000618423 90 ntBASIC28.3■■■□□ 2.12
LINS1Q8NG48 pRNA.13-201ENST00000619112 90 ntBASIC28.3■■■□□ 2.12
LINS1Q8NG48 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
LINS1Q8NG48 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
LINS1Q8NG48 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC28.29■■■□□ 2.12
LINS1Q8NG48 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
LINS1Q8NG48 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
LINS1Q8NG48 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
LINS1Q8NG48 AP001330.3-201ENST00000520123 633 ntBASIC28.29■■■□□ 2.12
LINS1Q8NG48 DUX4L4-201ENST00000566884 1269 ntBASIC28.29■■■□□ 2.12
LINS1Q8NG48 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC28.29■■■□□ 2.12
LINS1Q8NG48 AL136967.2-201ENST00000623968 743 ntBASIC28.29■■■□□ 2.12
LINS1Q8NG48 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
LINS1Q8NG48 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
LINS1Q8NG48 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
LINS1Q8NG48 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
LINS1Q8NG48 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC28.28■■■□□ 2.12
LINS1Q8NG48 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC28.28■■■□□ 2.12
LINS1Q8NG48 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
LINS1Q8NG48 MIR939-201ENST00000401314 82 ntBASIC28.28■■■□□ 2.12
LINS1Q8NG48 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
LINS1Q8NG48 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
LINS1Q8NG48 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
LINS1Q8NG48 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
LINS1Q8NG48 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC28.27■■■□□ 2.12
LINS1Q8NG48 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
LINS1Q8NG48 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
LINS1Q8NG48 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC28.27■■■□□ 2.12
LINS1Q8NG48 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
LINS1Q8NG48 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC28.27■■■□□ 2.12
LINS1Q8NG48 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
LINS1Q8NG48 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
LINS1Q8NG48 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
LINS1Q8NG48 EBPL-204ENST00000378272 766 ntTSL 3 BASIC28.26■■■□□ 2.11
LINS1Q8NG48 AF213884.3-201ENST00000563833 479 ntBASIC28.26■■■□□ 2.11
LINS1Q8NG48 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC28.26■■■□□ 2.11
LINS1Q8NG48 AL499627.2-201ENST00000606283 725 ntBASIC28.26■■■□□ 2.11
LINS1Q8NG48 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC28.26■■■□□ 2.11
LINS1Q8NG48 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
LINS1Q8NG48 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
LINS1Q8NG48 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC28.25■■■□□ 2.11
LINS1Q8NG48 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
LINS1Q8NG48 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC28.25■■■□□ 2.11
LINS1Q8NG48 LINC01529-204ENST00000636474 1715 ntBASIC28.25■■■□□ 2.11
LINS1Q8NG48 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
LINS1Q8NG48 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
LINS1Q8NG48 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
LINS1Q8NG48 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
LINS1Q8NG48 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC28.24■■■□□ 2.11
LINS1Q8NG48 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
LINS1Q8NG48 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms