Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC12.42□□□□□ -0.42
SPTSSBQ8NFR3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SPTSSBQ8NFR3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SPTSSBQ8NFR3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SPTSSBQ8NFR3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SPTSSBQ8NFR3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SPTSSBQ8NFR3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SPTSSBQ8NFR3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SPTSSBQ8NFR3 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SPTSSBQ8NFR3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SPTSSBQ8NFR3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SPTSSBQ8NFR3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC12.42□□□□□ -0.42
SPTSSBQ8NFR3 AC018358.1-201ENST00000631079 1402 ntBASIC12.42□□□□□ -0.42
SPTSSBQ8NFR3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC12.42□□□□□ -0.42
SPTSSBQ8NFR3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SPTSSBQ8NFR3 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SPTSSBQ8NFR3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SPTSSBQ8NFR3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SPTSSBQ8NFR3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SPTSSBQ8NFR3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SPTSSBQ8NFR3 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SPTSSBQ8NFR3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SPTSSBQ8NFR3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SPTSSBQ8NFR3 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SPTSSBQ8NFR3 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SPTSSBQ8NFR3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SPTSSBQ8NFR3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC12.41□□□□□ -0.42
SPTSSBQ8NFR3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
SPTSSBQ8NFR3 WHAMMP3-201ENST00000611636 1609 ntBASIC12.41□□□□□ -0.42
SPTSSBQ8NFR3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC12.41□□□□□ -0.42
SPTSSBQ8NFR3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
SPTSSBQ8NFR3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SPTSSBQ8NFR3 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SPTSSBQ8NFR3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SPTSSBQ8NFR3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SPTSSBQ8NFR3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SPTSSBQ8NFR3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
SPTSSBQ8NFR3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SPTSSBQ8NFR3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SPTSSBQ8NFR3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SPTSSBQ8NFR3 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SPTSSBQ8NFR3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC12.41□□□□□ -0.42
SPTSSBQ8NFR3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SPTSSBQ8NFR3 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SPTSSBQ8NFR3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SPTSSBQ8NFR3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC12.41□□□□□ -0.42
SPTSSBQ8NFR3 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SPTSSBQ8NFR3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
SPTSSBQ8NFR3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SPTSSBQ8NFR3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SPTSSBQ8NFR3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SPTSSBQ8NFR3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SPTSSBQ8NFR3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SPTSSBQ8NFR3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
SPTSSBQ8NFR3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC12.4□□□□□ -0.42
SPTSSBQ8NFR3 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SPTSSBQ8NFR3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SPTSSBQ8NFR3 AL158211.5-201ENST00000623583 2518 ntBASIC12.4□□□□□ -0.42
SPTSSBQ8NFR3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SPTSSBQ8NFR3 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SPTSSBQ8NFR3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SPTSSBQ8NFR3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC12.39□□□□□ -0.43
SPTSSBQ8NFR3 WASH5P-204ENST00000632292 975 ntBASIC12.39□□□□□ -0.43
SPTSSBQ8NFR3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SPTSSBQ8NFR3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SPTSSBQ8NFR3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC12.39□□□□□ -0.43
SPTSSBQ8NFR3 AC007375.3-201ENST00000600936 2314 ntBASIC12.39□□□□□ -0.43
SPTSSBQ8NFR3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SPTSSBQ8NFR3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SPTSSBQ8NFR3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SPTSSBQ8NFR3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SPTSSBQ8NFR3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
SPTSSBQ8NFR3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC12.38□□□□□ -0.43
SPTSSBQ8NFR3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SPTSSBQ8NFR3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
SPTSSBQ8NFR3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SPTSSBQ8NFR3 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC12.38□□□□□ -0.43
SPTSSBQ8NFR3 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SPTSSBQ8NFR3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SPTSSBQ8NFR3 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SPTSSBQ8NFR3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SPTSSBQ8NFR3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SPTSSBQ8NFR3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
SPTSSBQ8NFR3 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SPTSSBQ8NFR3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SPTSSBQ8NFR3 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
SPTSSBQ8NFR3 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
SPTSSBQ8NFR3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SPTSSBQ8NFR3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC12.38□□□□□ -0.43
SPTSSBQ8NFR3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SPTSSBQ8NFR3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
SPTSSBQ8NFR3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SPTSSBQ8NFR3 AC073130.3-201ENST00000624389 2278 ntBASIC12.37□□□□□ -0.43
SPTSSBQ8NFR3 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SPTSSBQ8NFR3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SPTSSBQ8NFR3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SPTSSBQ8NFR3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SPTSSBQ8NFR3 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SPTSSBQ8NFR3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SPTSSBQ8NFR3 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms