Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C3orf56Q8N813 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.6■□□□□ 0.41
C3orf56Q8N813 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.6■□□□□ 0.41
C3orf56Q8N813 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
C3orf56Q8N813 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C3orf56Q8N813 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.6■□□□□ 0.41
C3orf56Q8N813 AC104771.1-201ENST00000603335 964 ntBASIC17.6■□□□□ 0.41
C3orf56Q8N813 AL109923.1-201ENST00000618799 583 ntBASIC17.6■□□□□ 0.41
C3orf56Q8N813 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
C3orf56Q8N813 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
C3orf56Q8N813 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.6■□□□□ 0.41
C3orf56Q8N813 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.6■□□□□ 0.41
C3orf56Q8N813 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC17.6■□□□□ 0.41
C3orf56Q8N813 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
C3orf56Q8N813 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
C3orf56Q8N813 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
C3orf56Q8N813 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
C3orf56Q8N813 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
C3orf56Q8N813 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.59■□□□□ 0.41
C3orf56Q8N813 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
C3orf56Q8N813 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.59■□□□□ 0.41
C3orf56Q8N813 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
C3orf56Q8N813 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.59■□□□□ 0.41
C3orf56Q8N813 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.59■□□□□ 0.41
C3orf56Q8N813 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.59■□□□□ 0.41
C3orf56Q8N813 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.59■□□□□ 0.41
C3orf56Q8N813 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.59■□□□□ 0.41
C3orf56Q8N813 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.58■□□□□ 0.41
C3orf56Q8N813 AC141586.4-201ENST00000624558 1573 ntBASIC17.58■□□□□ 0.41
C3orf56Q8N813 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
C3orf56Q8N813 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
C3orf56Q8N813 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC17.58■□□□□ 0.4
C3orf56Q8N813 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
C3orf56Q8N813 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.58■□□□□ 0.4
C3orf56Q8N813 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.58■□□□□ 0.4
C3orf56Q8N813 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
C3orf56Q8N813 AC006015.1-201ENST00000429970 570 ntBASIC17.58■□□□□ 0.4
C3orf56Q8N813 CDCA4P2-201ENST00000441182 718 ntBASIC17.58■□□□□ 0.4
C3orf56Q8N813 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.58■□□□□ 0.4
C3orf56Q8N813 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
C3orf56Q8N813 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
C3orf56Q8N813 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
C3orf56Q8N813 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
C3orf56Q8N813 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
C3orf56Q8N813 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C3orf56Q8N813 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
C3orf56Q8N813 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.57■□□□□ 0.4
C3orf56Q8N813 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C3orf56Q8N813 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.57■□□□□ 0.4
C3orf56Q8N813 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
C3orf56Q8N813 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C3orf56Q8N813 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.57■□□□□ 0.4
C3orf56Q8N813 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.57■□□□□ 0.4
C3orf56Q8N813 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.57■□□□□ 0.4
C3orf56Q8N813 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.57■□□□□ 0.4
C3orf56Q8N813 BID-214ENST00000617586 542 ntTSL 5 BASIC17.57■□□□□ 0.4
C3orf56Q8N813 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
C3orf56Q8N813 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C3orf56Q8N813 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC17.57■□□□□ 0.4
C3orf56Q8N813 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
C3orf56Q8N813 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.57■□□□□ 0.4
C3orf56Q8N813 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C3orf56Q8N813 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C3orf56Q8N813 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
C3orf56Q8N813 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C3orf56Q8N813 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC17.56■□□□□ 0.4
C3orf56Q8N813 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C3orf56Q8N813 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
C3orf56Q8N813 ERN1-208ENST00000606895 2068 ntBASIC17.56■□□□□ 0.4
C3orf56Q8N813 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
C3orf56Q8N813 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.56■□□□□ 0.4
C3orf56Q8N813 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
C3orf56Q8N813 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
C3orf56Q8N813 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
C3orf56Q8N813 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
C3orf56Q8N813 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.55■□□□□ 0.4
C3orf56Q8N813 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C3orf56Q8N813 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
C3orf56Q8N813 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
C3orf56Q8N813 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C3orf56Q8N813 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.55■□□□□ 0.4
C3orf56Q8N813 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.55■□□□□ 0.4
C3orf56Q8N813 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
C3orf56Q8N813 RAP2CP1-201ENST00000605103 478 ntBASIC17.55■□□□□ 0.4
C3orf56Q8N813 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
C3orf56Q8N813 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.55■□□□□ 0.4
C3orf56Q8N813 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C3orf56Q8N813 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
C3orf56Q8N813 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
C3orf56Q8N813 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.55■□□□□ 0.4
C3orf56Q8N813 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
C3orf56Q8N813 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.54■□□□□ 0.4
C3orf56Q8N813 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C3orf56Q8N813 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
C3orf56Q8N813 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.54■□□□□ 0.4
C3orf56Q8N813 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
C3orf56Q8N813 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.54■□□□□ 0.4
C3orf56Q8N813 CD99P1-205ENST00000527459 561 ntBASIC17.54■□□□□ 0.4
C3orf56Q8N813 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.54■□□□□ 0.4
C3orf56Q8N813 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms